Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 IGKV2D-36-201ENST00000518643 226 ntBASIC3.14□□□□□ -1.91
SHMT2P34897 RPL12P22-201ENST00000519073 490 ntBASIC3.14□□□□□ -1.91
SHMT2P34897 AP003102.1-201ENST00000525638 661 ntBASIC3.14□□□□□ -1.91
SHMT2P34897 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.14□□□□□ -1.91
SHMT2P34897 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.14□□□□□ -1.91
SHMT2P34897 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC090330.1-201ENST00000588646 764 ntBASIC3.14□□□□□ -1.91
SHMT2P34897 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC099778.2-201ENST00000610904 211 ntBASIC3.14□□□□□ -1.91
SHMT2P34897 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHMT2P34897 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.14□□□□□ -1.91
SHMT2P34897 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.14□□□□□ -1.91
SHMT2P34897 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SHMT2P34897 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
SHMT2P34897 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.13□□□□□ -1.91
SHMT2P34897 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.13□□□□□ -1.91
SHMT2P34897 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
SHMT2P34897 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHMT2P34897 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.13□□□□□ -1.91
SHMT2P34897 RNU6-582P-201ENST00000362989 107 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 RNU6-839P-201ENST00000363347 108 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHMT2P34897 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
SHMT2P34897 MIR649-201ENST00000384843 97 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AL353678.1-201ENST00000422735 741 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AC012498.1-201ENST00000424037 437 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 MTCYBP32-201ENST00000427945 1084 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC104073.1-201ENST00000451988 151 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 BX510359.1-201ENST00000456973 237 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AP002884.2-201ENST00000471647 395 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 RPL31P13-201ENST00000484151 370 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.13□□□□□ -1.91
SHMT2P34897 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.13□□□□□ -1.91
SHMT2P34897 RPL21P12-201ENST00000559810 515 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.13□□□□□ -1.91
SHMT2P34897 ZNF415P1-201ENST00000582279 1166 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.13□□□□□ -1.91
SHMT2P34897 MIR5195-201ENST00000583555 115 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 AC124016.2-201ENST00000610058 665 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC073476.4-201ENST00000628409 72 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.13□□□□□ -1.91
SHMT2P34897 AC106858.1-201ENST00000637497 429 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHMT2P34897 AL355578.1-201ENST00000607405 1328 ntBASIC3.13□□□□□ -1.91
SHMT2P34897 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SHMT2P34897 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.12□□□□□ -1.91
SHMT2P34897 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
SHMT2P34897 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SHMT2P34897 U3.6-201ENST00000363622 211 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 RNU6-115P-201ENST00000364310 107 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 U3.11-201ENST00000364476 212 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
SHMT2P34897 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.12□□□□□ -1.91
SHMT2P34897 RNU6-1257P-201ENST00000384625 110 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 SNORA48.8-201ENST00000391324 134 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 RPL21P3-201ENST00000395517 478 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AL121978.1-201ENST00000402778 359 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 RPL7P27-201ENST00000403775 720 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 FCF1P2-201ENST00000415284 583 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 OFD1P18Y-201ENST00000420889 959 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.12□□□□□ -1.91
SHMT2P34897 HMGN2P20-201ENST00000437531 273 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 HMGB1P12-201ENST00000438594 598 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.12□□□□□ -1.91
SHMT2P34897 ELOCP23-201ENST00000452014 332 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AC146507.2-201ENST00000460608 476 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 RN7SL75P-201ENST00000461926 281 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.12□□□□□ -1.91
SHMT2P34897 AC092185.1-201ENST00000491371 97 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.12□□□□□ -1.91
SHMT2P34897 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.12□□□□□ -1.91
SHMT2P34897 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.12□□□□□ -1.91
SHMT2P34897 AC112206.4-201ENST00000515142 405 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 snoZ278.1-201ENST00000517059 112 ntBASIC3.12□□□□□ -1.91
SHMT2P34897 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.12□□□□□ -1.91
SHMT2P34897 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms