Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 RNU1-35P-201ENST00000362782 153 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.19□□□□□ -1.9
CASQ1P31415 AL096701.2-201ENST00000416920 238 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.19□□□□□ -1.9
CASQ1P31415 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.19□□□□□ -1.9
CASQ1P31415 SNRPGP6-201ENST00000451124 220 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AL359385.1-201ENST00000456509 365 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.19□□□□□ -1.9
CASQ1P31415 NAP1L1P3-201ENST00000462291 880 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 DYNLL1P6-201ENST00000503440 264 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.19□□□□□ -1.9
CASQ1P31415 MTND5P4-201ENST00000514978 288 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC025881.1-201ENST00000518851 512 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.19□□□□□ -1.9
CASQ1P31415 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.19□□□□□ -1.9
CASQ1P31415 AC087272.1-201ENST00000523624 533 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC083923.1-201ENST00000523708 376 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 MTCO1P47-201ENST00000523889 1271 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AP000857.1-201ENST00000532151 543 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AP000867.2-201ENST00000532468 320 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC007224.1-201ENST00000564410 144 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.19□□□□□ -1.9
CASQ1P31415 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
CASQ1P31415 AC245389.1-201ENST00000605141 529 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC105227.2-201ENST00000615075 605 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 AC068722.2-201ENST00000618734 544 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.19□□□□□ -1.9
CASQ1P31415 AP000526.1-201ENST00000603308 1388 ntBASIC3.19□□□□□ -1.9
CASQ1P31415 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
CASQ1P31415 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
CASQ1P31415 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASQ1P31415 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.18□□□□□ -1.9
CASQ1P31415 RNU6-543P-201ENST00000362576 108 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 MIR181A2-201ENST00000384863 110 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 MIR218-2-201ENST00000385006 110 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 CYCSP45-201ENST00000402289 315 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 RNU2-17P-201ENST00000410290 190 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 SYF2P2-201ENST00000417620 583 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.18□□□□□ -1.9
CASQ1P31415 MTCO1P57-201ENST00000432182 261 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.18□□□□□ -1.9
CASQ1P31415 MTND2P19-201ENST00000449129 1012 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 RPS29P2-201ENST00000479278 136 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 CBX3P3-201ENST00000508108 532 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.18□□□□□ -1.9
CASQ1P31415 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.18□□□□□ -1.9
CASQ1P31415 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 OR5B10P-201ENST00000532869 642 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AC022069.1-201ENST00000582910 658 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.18□□□□□ -1.9
CASQ1P31415 AC006329.2-201ENST00000611491 394 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.18□□□□□ -1.9
CASQ1P31415 CYCSP41-201ENST00000616920 296 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC3.18□□□□□ -1.9
CASQ1P31415 AC079228.1-201ENST00000624774 1049 ntBASIC3.18□□□□□ -1.9
CASQ1P31415 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.18□□□□□ -1.9
CASQ1P31415 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASQ1P31415 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASQ1P31415 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASQ1P31415 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.17□□□□□ -1.9
CASQ1P31415 AL035425.3-201ENST00000564206 4996 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.17□□□□□ -1.9
CASQ1P31415 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC073325.2-201ENST00000339545 159 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 ARF4P3-201ENST00000397387 509 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AC096533.1-201ENST00000411645 353 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 TATDN1P1-201ENST00000414123 891 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 HSPD1P21-201ENST00000436541 245 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASQ1P31415 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 RAB11AP1-201ENST00000442978 646 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AP000705.1-201ENST00000454567 350 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 OR2A20P-203ENST00000498397 1268 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC3.17□□□□□ -1.9
CASQ1P31415 MGST1-215ENST00000540056 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC107016.2-201ENST00000547968 190 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.17□□□□□ -1.9
CASQ1P31415 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.17□□□□□ -1.9
CASQ1P31415 MIR3670-2-201ENST00000582974 65 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 MIR3670-1-201ENST00000584160 65 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 MIR3670-3-201ENST00000584855 65 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AC024560.3-201ENST00000608482 349 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.17□□□□□ -1.9
CASQ1P31415 MIR3670-4-201ENST00000612260 65 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AL121772.2-201ENST00000614331 297 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AC068880.5-201ENST00000624331 290 ntBASIC3.17□□□□□ -1.9
CASQ1P31415 AC009039.2-201ENST00000624524 529 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms