Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 MTND5P3-201ENST00000438536 1800 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 FRG1CP-201ENST00000358464 769 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 RNU4-35P-201ENST00000362588 141 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXA13P31271 ARF4P3-201ENST00000397387 509 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 MIR1284-201ENST00000408337 120 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 MTCYBP24-201ENST00000420387 1106 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 RPL21P109-201ENST00000422213 475 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 FTH1P6-201ENST00000430768 320 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 EXTL2P1-201ENST00000446218 416 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC133473.1-201ENST00000455173 299 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 U3.44-201ENST00000458938 192 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 RN7SKP116-201ENST00000516902 319 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXA13P31271 PDCL2P2-201ENST00000533651 189 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 MRPS36P5-201ENST00000551909 298 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC087465.1-201ENST00000560574 245 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 AC107954.1-201ENST00000565906 727 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXA13P31271 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.05□□□□□ -1.76
HOXA13P31271 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 KLKP1-201ENST00000595979 403 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AC124312.4-201ENST00000605533 310 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 MIR7975-201ENST00000619350 68 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 CYP3A51P-201ENST00000633513 256 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXA13P31271 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXA13P31271 AL732372.2-225ENST00000642124 456 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 AC012321.1-201ENST00000561622 1588 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXA13P31271 AL390862.1-201ENST00000635467 1469 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 NCAPGP1-201ENST00000505112 1814 ntBASIC4.05□□□□□ -1.76
HOXA13P31271 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA13P31271 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA13P31271 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA13P31271 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA13P31271 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA13P31271 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HOXA13P31271 RNU6-1214P-201ENST00000363650 109 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HOXA13P31271 RNU6-157P-201ENST00000383957 107 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 RN7SKP53-201ENST00000411337 315 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 USP9YP33-201ENST00000412220 421 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AP000907.1-201ENST00000428428 510 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXA13P31271 AC008568.1-203ENST00000433406 765 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 USP9YP35-201ENST00000435696 412 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 MTND2P20-201ENST00000440805 661 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 RBMY2UP-201ENST00000453474 324 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 RPL18AP17-201ENST00000455326 198 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA13P31271 AC008155.2-201ENST00000464337 397 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 PABPC1P3-201ENST00000469174 459 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 FAM172BP-201ENST00000487497 1089 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 RPL7P38-201ENST00000488396 739 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.04□□□□□ -1.76
HOXA13P31271 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC4.04□□□□□ -1.76
HOXA13P31271 RN7SKP83-201ENST00000516512 178 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 RNU4-60P-201ENST00000517239 135 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HOXA13P31271 ZNF321P-202ENST00000550843 495 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 DUXAP1-201ENST00000556632 463 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.04□□□□□ -1.76
HOXA13P31271 BNIP3P24-201ENST00000593398 557 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 AC245297.2-201ENST00000610119 565 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 MIR486-1-201ENST00000612171 68 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.04□□□□□ -1.76
HOXA13P31271 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.03□□□□□ -1.76
HOXA13P31271 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA13P31271 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA13P31271 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms