Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 SNORA9.2-201ENST00000365361 133 ntBASIC3.19□□□□□ -1.9
TPM1P09493 RNU6-444P-201ENST00000383988 108 ntBASIC3.19□□□□□ -1.9
TPM1P09493 MIR200C-201ENST00000384980 68 ntBASIC3.19□□□□□ -1.9
TPM1P09493 RPL19P1-201ENST00000411635 428 ntBASIC3.19□□□□□ -1.9
TPM1P09493 ATG3P1-201ENST00000419507 911 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AC096632.1-201ENST00000427395 310 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AC091390.1-201ENST00000433904 331 ntBASIC3.19□□□□□ -1.9
TPM1P09493 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.19□□□□□ -1.9
TPM1P09493 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM1P09493 RNA5SP310-201ENST00000459084 116 ntBASIC3.19□□□□□ -1.9
TPM1P09493 RN7SL293P-201ENST00000481765 281 ntBASIC3.19□□□□□ -1.9
TPM1P09493 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.19□□□□□ -1.9
TPM1P09493 PRELID3BP5-201ENST00000508612 460 ntBASIC3.19□□□□□ -1.9
TPM1P09493 SNORA9.3-201ENST00000516383 129 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AC023632.4-201ENST00000517783 191 ntBASIC3.19□□□□□ -1.9
TPM1P09493 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.19□□□□□ -1.9
TPM1P09493 AC004486.1-201ENST00000546846 233 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM1P09493 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM1P09493 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.19□□□□□ -1.9
TPM1P09493 MIR3670-2-201ENST00000582974 65 ntBASIC3.19□□□□□ -1.9
TPM1P09493 MIR3670-1-201ENST00000584160 65 ntBASIC3.19□□□□□ -1.9
TPM1P09493 MIR3670-3-201ENST00000584855 65 ntBASIC3.19□□□□□ -1.9
TPM1P09493 HSPE1P14-201ENST00000605812 302 ntBASIC3.19□□□□□ -1.9
TPM1P09493 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.19□□□□□ -1.9
TPM1P09493 MIR3670-4-201ENST00000612260 65 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AL162574.2-201ENST00000614618 657 ntBASIC3.19□□□□□ -1.9
TPM1P09493 AC090116.1-201ENST00000615679 446 ntBASIC3.19□□□□□ -1.9
TPM1P09493 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.19□□□□□ -1.9
TPM1P09493 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.19□□□□□ -1.9
TPM1P09493 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
TPM1P09493 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
TPM1P09493 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.19□□□□□ -1.9
TPM1P09493 AL355596.1-201ENST00000565399 3996 ntBASIC3.19□□□□□ -1.9
TPM1P09493 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TPM1P09493 AC091564.4-201ENST00000533934 2194 ntBASIC3.18□□□□□ -1.9
TPM1P09493 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM1P09493 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
TPM1P09493 AC009501.3-201ENST00000605001 1352 ntBASIC3.18□□□□□ -1.9
TPM1P09493 OR5H2-201ENST00000355273 945 ntBASIC3.18□□□□□ -1.9
TPM1P09493 RNU6-1339P-201ENST00000363574 91 ntBASIC3.18□□□□□ -1.9
TPM1P09493 RNU6-1027P-201ENST00000383998 107 ntBASIC3.18□□□□□ -1.9
TPM1P09493 SNORA11C-201ENST00000408532 129 ntBASIC3.18□□□□□ -1.9
TPM1P09493 MIR1289-1-201ENST00000408836 144 ntBASIC3.18□□□□□ -1.9
TPM1P09493 UBE2V1P9-201ENST00000414760 368 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AL096701.2-201ENST00000416920 238 ntBASIC3.18□□□□□ -1.9
TPM1P09493 FNDC3CP-201ENST00000420795 1155 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 XKRY2-201ENST00000442362 1093 ntBASIC3.18□□□□□ -1.9
TPM1P09493 CDC27P1-201ENST00000445384 715 ntBASIC3.18□□□□□ -1.9
TPM1P09493 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TPM1P09493 AP001025.2-201ENST00000490908 477 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AC096751.1-202ENST00000502691 1067 ntBASIC3.18□□□□□ -1.9
TPM1P09493 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TPM1P09493 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM1P09493 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.18□□□□□ -1.9
TPM1P09493 AC012414.2-201ENST00000559474 187 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.18□□□□□ -1.9
TPM1P09493 AC012254.4-201ENST00000588843 273 ntBASIC3.18□□□□□ -1.9
TPM1P09493 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC3.18□□□□□ -1.9
TPM1P09493 AP000787.2-201ENST00000604432 568 ntBASIC3.18□□□□□ -1.9
TPM1P09493 MIR6076-201ENST00000617521 113 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AC020763.5-201ENST00000623298 430 ntBASIC3.18□□□□□ -1.9
TPM1P09493 AP003400.6-201ENST00000624698 740 ntBASIC3.18□□□□□ -1.9
TPM1P09493 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM1P09493 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TPM1P09493 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.18□□□□□ -1.9
TPM1P09493 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TPM1P09493 AC244517.1-201ENST00000606030 2086 ntBASIC3.17□□□□□ -1.9
TPM1P09493 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TPM1P09493 RNVU1-3-201ENST00000364313 161 ntBASIC3.17□□□□□ -1.9
TPM1P09493 RNA5SP479-201ENST00000364858 117 ntBASIC3.17□□□□□ -1.9
TPM1P09493 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
TPM1P09493 RNU6-441P-201ENST00000384545 106 ntBASIC3.17□□□□□ -1.9
TPM1P09493 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
TPM1P09493 MIR592-201ENST00000384959 97 ntBASIC3.17□□□□□ -1.9
TPM1P09493 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.17□□□□□ -1.9
TPM1P09493 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TPM1P09493 HMGB3P31-201ENST00000413333 595 ntBASIC3.17□□□□□ -1.9
TPM1P09493 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM1P09493 KCTD10P1-201ENST00000434203 625 ntBASIC3.17□□□□□ -1.9
TPM1P09493 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM1P09493 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM1P09493 Z75741.1-201ENST00000446793 314 ntBASIC3.17□□□□□ -1.9
TPM1P09493 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM1P09493 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM1P09493 RN7SL542P-201ENST00000467147 294 ntBASIC3.17□□□□□ -1.9
TPM1P09493 RPS27P23-201ENST00000487608 251 ntBASIC3.17□□□□□ -1.9
TPM1P09493 AC091917.2-201ENST00000505002 744 ntBASIC3.17□□□□□ -1.9
TPM1P09493 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TPM1P09493 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC3.17□□□□□ -1.9
TPM1P09493 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM1P09493 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.17□□□□□ -1.9
TPM1P09493 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.17□□□□□ -1.9
TPM1P09493 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.17□□□□□ -1.9
TPM1P09493 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 154.6 ms