Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CYCSP41-201ENST00000616920 296 ntBASIC3.11□□□□□ -1.91
TPM3P06753 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM3P06753 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM3P06753 AC096644.4-201ENST00000563417 2912 ntBASIC3.11□□□□□ -1.91
TPM3P06753 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
TPM3P06753 RNU6-263P-201ENST00000363811 107 ntBASIC3.1□□□□□ -1.91
TPM3P06753 RNU6-1180P-201ENST00000364935 107 ntBASIC3.1□□□□□ -1.91
TPM3P06753 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM3P06753 RNU6-152P-201ENST00000384037 107 ntBASIC3.1□□□□□ -1.91
TPM3P06753 SNORA54-201ENST00000384281 123 ntBASIC3.1□□□□□ -1.91
TPM3P06753 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TPM3P06753 AC025750.1-201ENST00000399891 379 ntBASIC3.1□□□□□ -1.91
TPM3P06753 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM3P06753 UBE2D3P2-201ENST00000424409 445 ntBASIC3.1□□□□□ -1.91
TPM3P06753 AC005326.1-201ENST00000429197 123 ntBASIC3.1□□□□□ -1.91
TPM3P06753 UBE2V1P6-201ENST00000430840 422 ntBASIC3.1□□□□□ -1.91
TPM3P06753 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TPM3P06753 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM3P06753 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM3P06753 AC004062.1-201ENST00000509926 645 ntBASIC3.1□□□□□ -1.91
TPM3P06753 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.1□□□□□ -1.91
TPM3P06753 RPPH1-2P-201ENST00000516688 293 ntBASIC3.1□□□□□ -1.91
TPM3P06753 AC104997.1-201ENST00000519761 717 ntBASIC3.1□□□□□ -1.91
TPM3P06753 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.1□□□□□ -1.91
TPM3P06753 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM3P06753 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM3P06753 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.1□□□□□ -1.91
TPM3P06753 CR383656.14-201ENST00000551951 406 ntBASIC3.1□□□□□ -1.91
TPM3P06753 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
TPM3P06753 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM3P06753 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM3P06753 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM3P06753 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM3P06753 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
TPM3P06753 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM3P06753 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
TPM3P06753 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
TPM3P06753 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM3P06753 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM3P06753 RNA5SP393-201ENST00000363423 117 ntBASIC3.09□□□□□ -1.91
TPM3P06753 RNU6-374P-201ENST00000364146 108 ntBASIC3.09□□□□□ -1.91
TPM3P06753 SNORA62.3-201ENST00000365110 153 ntBASIC3.09□□□□□ -1.91
TPM3P06753 DSTNP4-201ENST00000399472 474 ntBASIC3.09□□□□□ -1.91
TPM3P06753 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.09□□□□□ -1.91
TPM3P06753 RNA5SP56-201ENST00000410277 118 ntBASIC3.09□□□□□ -1.91
TPM3P06753 OFD1P18Y-201ENST00000420889 959 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC005300.1-201ENST00000428401 373 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM3P06753 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.09□□□□□ -1.91
TPM3P06753 NIPA2P5-201ENST00000452282 464 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM3P06753 SRIP1-201ENST00000489235 288 ntBASIC3.09□□□□□ -1.91
TPM3P06753 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.09□□□□□ -1.91
TPM3P06753 OR7K1P-201ENST00000546439 926 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.09□□□□□ -1.91
TPM3P06753 MIR5004-201ENST00000579078 107 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC008277.2-201ENST00000605196 797 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC140725.3-201ENST00000616193 880 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC018755.4-201ENST00000619715 454 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC015967.1-201ENST00000619893 476 ntBASIC3.09□□□□□ -1.91
TPM3P06753 AC103798.2-201ENST00000624292 632 ntBASIC3.09□□□□□ -1.91
TPM3P06753 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.09□□□□□ -1.91
TPM3P06753 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.09□□□□□ -1.92
TPM3P06753 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
TPM3P06753 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.08□□□□□ -1.92
TPM3P06753 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TPM3P06753 AL672167.1-206ENST00000356293 943 ntBASIC3.08□□□□□ -1.92
TPM3P06753 RNU6-819P-201ENST00000364116 107 ntBASIC3.08□□□□□ -1.92
TPM3P06753 Y_RNA.625-201ENST00000411256 107 ntBASIC3.08□□□□□ -1.92
TPM3P06753 LINC01347-201ENST00000417964 355 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM3P06753 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TPM3P06753 AC022018.1-201ENST00000430685 241 ntBASIC3.08□□□□□ -1.92
TPM3P06753 RPS20P5-201ENST00000434808 360 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC127537.2-201ENST00000439258 465 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AL606490.8-201ENST00000441624 319 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AL359073.1-201ENST00000448036 403 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.08□□□□□ -1.92
TPM3P06753 AP000852.1-201ENST00000472460 573 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AP002812.1-201ENST00000495378 474 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC083906.5-201ENST00000503722 328 ntBASIC3.08□□□□□ -1.92
TPM3P06753 WBP1LP4-201ENST00000505043 344 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC008885.1-201ENST00000514930 301 ntBASIC3.08□□□□□ -1.92
TPM3P06753 HMGB1P23-201ENST00000518743 568 ntBASIC3.08□□□□□ -1.92
TPM3P06753 DUXAP2-201ENST00000519198 589 ntBASIC3.08□□□□□ -1.92
TPM3P06753 PSMA2P1-201ENST00000526365 646 ntBASIC3.08□□□□□ -1.92
TPM3P06753 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.08□□□□□ -1.92
TPM3P06753 AL442163.2-201ENST00000553912 710 ntBASIC3.08□□□□□ -1.92
TPM3P06753 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.08□□□□□ -1.92
TPM3P06753 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.08□□□□□ -1.92
TPM3P06753 AC092474.3-201ENST00000603022 568 ntBASIC3.08□□□□□ -1.92
TPM3P06753 SUMO2P14-201ENST00000604488 293 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC073111.2-201ENST00000605657 1075 ntBASIC3.08□□□□□ -1.92
TPM3P06753 AC024560.3-201ENST00000608482 349 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 164.8 ms