Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 RNU6-1151P-201ENST00000384684 107 ntBASIC2.7□□□□□ -1.98
CD74P04233 SNORD17-201ENST00000390930 237 ntBASIC2.7□□□□□ -1.98
CD74P04233 RAD23BP2-201ENST00000416003 1207 ntBASIC2.7□□□□□ -1.98
CD74P04233 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.7□□□□□ -1.98
CD74P04233 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 AL390023.1-201ENST00000428836 262 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.7□□□□□ -1.98
CD74P04233 SUN3-208ENST00000453192 801 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 RBMY2UP-201ENST00000453474 324 ntBASIC2.7□□□□□ -1.98
CD74P04233 AL445669.2-201ENST00000454425 421 ntBASIC2.7□□□□□ -1.98
CD74P04233 PRDX3P4-201ENST00000470828 747 ntBASIC2.7□□□□□ -1.98
CD74P04233 RPS23P3-201ENST00000470993 430 ntBASIC2.7□□□□□ -1.98
CD74P04233 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 HMGN1P11-201ENST00000508668 303 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 RNU5A-7P-201ENST00000515979 116 ntBASIC2.7□□□□□ -1.98
CD74P04233 IGKV2-26-201ENST00000518305 343 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC026403.1-201ENST00000518938 295 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 AC124293.1-201ENST00000530034 493 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC103843.2-201ENST00000530523 682 ntBASIC2.7□□□□□ -1.98
CD74P04233 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 AC007536.1-201ENST00000533382 349 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.7□□□□□ -1.98
CD74P04233 CYB5AP5-201ENST00000549779 389 ntBASIC2.7□□□□□ -1.98
CD74P04233 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.7□□□□□ -1.98
CD74P04233 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.7□□□□□ -1.98
CD74P04233 MTCO1P40-201ENST00000574371 625 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC2.7□□□□□ -1.98
CD74P04233 SNORD84-203ENST00000584275 78 ntBASIC2.7□□□□□ -1.98
CD74P04233 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 AC018755.4-201ENST00000619715 454 ntBASIC2.7□□□□□ -1.98
CD74P04233 RBM12B-AS1-201ENST00000623283 653 ntBASIC2.7□□□□□ -1.98
CD74P04233 AP003122.6-201ENST00000623831 495 ntBASIC2.7□□□□□ -1.98
CD74P04233 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
CD74P04233 LRRC77P-213ENST00000637727 880 ntBASIC2.7□□□□□ -1.98
CD74P04233 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.7□□□□□ -1.98
CD74P04233 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CD74P04233 AC025263.3-201ENST00000622965 1396 ntBASIC2.7□□□□□ -1.98
CD74P04233 AL136520.1-201ENST00000600311 1322 ntBASIC2.69□□□□□ -1.98
CD74P04233 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.69□□□□□ -1.98
CD74P04233 OR6K3-202ENST00000368146 996 ntBASIC2.69□□□□□ -1.98
CD74P04233 AL031121.1-201ENST00000406553 254 ntBASIC2.69□□□□□ -1.98
CD74P04233 RPL5P18-201ENST00000406671 891 ntBASIC2.69□□□□□ -1.98
CD74P04233 RNA5SP56-201ENST00000410277 118 ntBASIC2.69□□□□□ -1.98
CD74P04233 RAB9AP3-201ENST00000412737 573 ntBASIC2.69□□□□□ -1.98
CD74P04233 RPS7P15-201ENST00000415804 584 ntBASIC2.69□□□□□ -1.98
CD74P04233 RPS3AP9-201ENST00000417027 792 ntBASIC2.69□□□□□ -1.98
CD74P04233 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.69□□□□□ -1.98
CD74P04233 AC069157.1-201ENST00000421749 137 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.69□□□□□ -1.98
CD74P04233 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AC006946.1-201ENST00000429106 328 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.69□□□□□ -1.98
CD74P04233 AC234064.1-201ENST00000436312 247 ntBASIC2.69□□□□□ -1.98
CD74P04233 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.69□□□□□ -1.98
CD74P04233 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.69□□□□□ -1.98
CD74P04233 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.69□□□□□ -1.98
CD74P04233 HMGN1P5-201ENST00000448591 263 ntBASIC2.69□□□□□ -1.98
CD74P04233 RAB9AP1-201ENST00000449393 573 ntBASIC2.69□□□□□ -1.98
CD74P04233 CDC42P1-201ENST00000456658 548 ntBASIC2.69□□□□□ -1.98
CD74P04233 snoU13.22-201ENST00000459428 104 ntBASIC2.69□□□□□ -1.98
CD74P04233 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AC017015.1-201ENST00000477387 286 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC011352.3-201ENST00000505162 593 ntBASIC2.69□□□□□ -1.98
CD74P04233 MTCO3P27-201ENST00000514397 196 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC104057.1-201ENST00000515547 497 ntBASIC2.69□□□□□ -1.98
CD74P04233 RN7SKP157-201ENST00000516174 282 ntBASIC2.69□□□□□ -1.98
CD74P04233 AP003355.1-201ENST00000518956 587 ntBASIC2.69□□□□□ -1.98
CD74P04233 HIGD1AP6-201ENST00000521833 279 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC006518.2-201ENST00000542513 940 ntBASIC2.69□□□□□ -1.98
CD74P04233 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.69□□□□□ -1.98
CD74P04233 AC010653.1-201ENST00000571108 881 ntBASIC2.69□□□□□ -1.98
CD74P04233 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC2.69□□□□□ -1.98
CD74P04233 AP002906.1-201ENST00000603405 233 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC013468.1-201ENST00000608680 598 ntBASIC2.69□□□□□ -1.98
CD74P04233 AC073348.1-201ENST00000623002 331 ntBASIC2.69□□□□□ -1.98
CD74P04233 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AL121594.5-201ENST00000631724 573 ntBASIC2.69□□□□□ -1.98
CD74P04233 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AC090897.3-201ENST00000636973 1157 ntBASIC2.69□□□□□ -1.98
CD74P04233 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.69□□□□□ -1.98
CD74P04233 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
CD74P04233 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.69□□□□□ -1.98
CD74P04233 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.68□□□□□ -1.98
CD74P04233 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 137.5 ms