Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 SNORA70.14-201ENST00000516205 110 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 OR4H12P-201ENST00000556269 907 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 YWHAZP1-201ENST00000556286 722 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 AC068714.1-201ENST00000559623 800 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
COL1A1P02452 AC023043.3-201ENST00000593113 385 ntBASIC2.9□□□□□ -1.95
COL1A1P02452 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
COL1A1P02452 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
COL1A1P02452 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.89□□□□□ -1.95
COL1A1P02452 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.89□□□□□ -1.95
COL1A1P02452 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 AC073464.3-201ENST00000422564 712 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 AC018634.1-201ENST00000437554 401 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 Z99127.2-201ENST00000441426 334 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 AC025181.1-201ENST00000477507 416 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 AP001086.1-201ENST00000494882 321 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.89□□□□□ -1.95
COL1A1P02452 AC026436.1-201ENST00000510537 270 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 NDUFB4P9-201ENST00000511646 388 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.89□□□□□ -1.95
COL1A1P02452 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.89□□□□□ -1.95
COL1A1P02452 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.89□□□□□ -1.95
COL1A1P02452 C2orf27A-204ENST00000623058 969 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 AC009501.3-201ENST00000605001 1352 ntBASIC2.89□□□□□ -1.95
COL1A1P02452 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC2.89□□□□□ -1.95
COL1A1P02452 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
COL1A1P02452 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
COL1A1P02452 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.88□□□□□ -1.95
COL1A1P02452 Y_RNA.118-201ENST00000363300 101 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 RNU6-1331P-201ENST00000363658 106 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 DYNLT3P1-201ENST00000378574 347 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
COL1A1P02452 RPL36AP6-201ENST00000435770 321 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 RPL30P9-201ENST00000465586 330 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.88□□□□□ -1.95
COL1A1P02452 RNA5SP281-201ENST00000516504 135 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 RNA5SP309-201ENST00000516670 106 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.88□□□□□ -1.95
COL1A1P02452 AC021269.2-201ENST00000532318 330 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.88□□□□□ -1.95
COL1A1P02452 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC2.88□□□□□ -1.95
COL1A1P02452 VN1R84P-201ENST00000593697 235 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 AC068313.1-201ENST00000604028 1008 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 AL392112.1-201ENST00000605115 829 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.88□□□□□ -1.95
COL1A1P02452 DCAF13P3-201ENST00000561147 1334 ntBASIC2.88□□□□□ -1.95
COL1A1P02452 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
COL1A1P02452 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL1A1P02452 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
COL1A1P02452 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL1A1P02452 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL1A1P02452 AL353093.1-201ENST00000441292 436 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.87□□□□□ -1.95
COL1A1P02452 AC087385.1-201ENST00000475062 312 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
COL1A1P02452 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
COL1A1P02452 RNU6-347P-201ENST00000516658 105 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
COL1A1P02452 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC2.87□□□□□ -1.95
COL1A1P02452 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.87□□□□□ -1.95
COL1A1P02452 AC074029.1-201ENST00000552531 1044 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 AC044913.1-201ENST00000557200 430 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 MIR4458-201ENST00000578872 75 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 NTAN1P1-201ENST00000603150 646 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 AC016727.1-205ENST00000605437 569 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 AC015849.6-201ENST00000605454 474 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 AC067747.1-201ENST00000608026 250 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.87□□□□□ -1.95
COL1A1P02452 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.87□□□□□ -1.95
COL1A1P02452 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
COL1A1P02452 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.87□□□□□ -1.95
COL1A1P02452 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.87□□□□□ -1.95
COL1A1P02452 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL1A1P02452 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL1A1P02452 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL1A1P02452 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.86□□□□□ -1.95
COL1A1P02452 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
COL1A1P02452 FAT1P1-201ENST00000406588 507 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 RN7SKP140-201ENST00000411196 284 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC2.86□□□□□ -1.95
COL1A1P02452 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
COL1A1P02452 AL590103.1-201ENST00000434488 307 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 RNA5SP445-201ENST00000515889 115 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.86□□□□□ -1.95
COL1A1P02452 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.86□□□□□ -1.95
COL1A1P02452 AC025811.1-201ENST00000604312 472 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.86□□□□□ -1.95
COL1A1P02452 AC004943.3-201ENST00000624116 600 ntBASIC2.86□□□□□ -1.95
COL1A1P02452 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.85□□□□□ -1.95
COL1A1P02452 AC091564.4-201ENST00000533934 2194 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
COL1A1P02452 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
COL1A1P02452 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 U3.15-201ENST00000365398 212 ntBASIC2.85□□□□□ -1.95
COL1A1P02452 SNORD6-201ENST00000365444 73 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms