Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AC008065.1-201ENST00000428525 348 ntBASIC3.86□□□□□ -1.79
LDLRP01130 COX6B1P7-201ENST00000430845 235 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 RPL23AP16-201ENST00000441715 421 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AL512326.1-201ENST00000443050 721 ntBASIC3.86□□□□□ -1.79
LDLRP01130 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 TAF9P1-201ENST00000445421 515 ntBASIC3.86□□□□□ -1.79
LDLRP01130 VN1R10P-201ENST00000447106 875 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 SLC31A1P1-201ENST00000451221 567 ntBASIC3.86□□□□□ -1.79
LDLRP01130 BX276092.4-201ENST00000452056 248 ntBASIC3.86□□□□□ -1.79
LDLRP01130 TAF9P2-201ENST00000454958 515 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 RPL36AP13-201ENST00000457490 317 ntBASIC3.86□□□□□ -1.79
LDLRP01130 RNU7-125P-201ENST00000458760 62 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC092754.2-201ENST00000463506 460 ntBASIC3.86□□□□□ -1.79
LDLRP01130 RPL7P38-201ENST00000488396 739 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC080014.1-201ENST00000496877 1201 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 AC093281.2-201ENST00000510153 597 ntBASIC3.86□□□□□ -1.79
LDLRP01130 MTND5P13-201ENST00000513046 1079 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC105185.1-201ENST00000518705 535 ntBASIC3.86□□□□□ -1.79
LDLRP01130 RPL12P22-201ENST00000519073 490 ntBASIC3.86□□□□□ -1.79
LDLRP01130 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.86□□□□□ -1.79
LDLRP01130 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 OR5AK1P-201ENST00000524837 922 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.86□□□□□ -1.79
LDLRP01130 ZNF705CP-201ENST00000530515 889 ntBASIC3.86□□□□□ -1.79
LDLRP01130 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC3.86□□□□□ -1.79
LDLRP01130 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.86□□□□□ -1.79
LDLRP01130 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.86□□□□□ -1.79
LDLRP01130 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 AP000811.1-201ENST00000603803 651 ntBASIC3.86□□□□□ -1.79
LDLRP01130 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 AC103591.3-201ENST00000608684 209 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC105429.2-201ENST00000610567 517 ntBASIC3.86□□□□□ -1.79
LDLRP01130 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC092650.2-201ENST00000619984 902 ntBASIC3.86□□□□□ -1.79
LDLRP01130 AC073530.2-201ENST00000623987 261 ntBASIC3.86□□□□□ -1.79
LDLRP01130 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LDLRP01130 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.86□□□□□ -1.79
LDLRP01130 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.86□□□□□ -1.79
LDLRP01130 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.86□□□□□ -1.79
LDLRP01130 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LDLRP01130 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
LDLRP01130 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
LDLRP01130 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
LDLRP01130 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 SGO1P2-201ENST00000429458 1589 ntBASIC3.85□□□□□ -1.79
LDLRP01130 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 RNU6-621P-201ENST00000364752 109 ntBASIC3.85□□□□□ -1.79
LDLRP01130 ENSAP1-201ENST00000392855 326 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 AC093578.1-201ENST00000415219 368 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 AC092427.1-201ENST00000439177 601 ntBASIC3.85□□□□□ -1.79
LDLRP01130 MTND5P2-201ENST00000442927 1142 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL360221.1-201ENST00000445989 335 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL500522.2-201ENST00000448562 343 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 AL136126.1-201ENST00000473603 402 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC106872.2-201ENST00000494303 480 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.85□□□□□ -1.79
LDLRP01130 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
LDLRP01130 AC104057.1-201ENST00000515547 497 ntBASIC3.85□□□□□ -1.79
LDLRP01130 NRON-201ENST00000517270 370 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.85□□□□□ -1.79
LDLRP01130 AC008127.2-201ENST00000549925 1075 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL389895.1-201ENST00000554127 252 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 HSPE1P5-201ENST00000561489 272 ntBASIC3.85□□□□□ -1.79
LDLRP01130 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.85□□□□□ -1.79
LDLRP01130 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.85□□□□□ -1.79
LDLRP01130 AC012468.1-201ENST00000604888 430 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL592221.1-201ENST00000605266 382 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 SNORA51-201ENST00000606420 132 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.85□□□□□ -1.79
LDLRP01130 AL354976.1-201ENST00000613843 387 ntBASIC3.85□□□□□ -1.79
LDLRP01130 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.85□□□□□ -1.79
LDLRP01130 Z69908.1-201ENST00000622603 247 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms