Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN9O95484 AC040168.1-201ENST00000623594 991 ntBASIC3.15□□□□□ -1.91
CLDN9O95484 AC091903.1-201ENST00000624322 454 ntBASIC3.15□□□□□ -1.91
CLDN9O95484 SNORA50A-202ENST00000629536 136 ntBASIC3.15□□□□□ -1.91
CLDN9O95484 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN9O95484 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN9O95484 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.15□□□□□ -1.91
CLDN9O95484 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLDN9O95484 MTND4P34-201ENST00000572715 1371 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN9O95484 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN9O95484 SNORA9-201ENST00000384215 133 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 MIR491-201ENST00000384877 84 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AL355615.1-201ENST00000406187 641 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AL133264.1-201ENST00000407157 562 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 HMGN1P24-201ENST00000412282 298 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 MTCYBP32-201ENST00000427945 1084 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 SETP5-201ENST00000437270 562 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 PDSS1P2-201ENST00000449397 678 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 RPS20P24-201ENST00000457473 361 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 VPS26AP1-201ENST00000483197 979 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 AC084024.2-201ENST00000503480 791 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC093767.1-201ENST00000504523 156 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC006499.5-201ENST00000505037 514 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN9O95484 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN9O95484 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 MTCO3P27-201ENST00000514397 196 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 SNORA70.24-201ENST00000517233 118 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 SCARNA20.6-201ENST00000517251 106 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AP003355.1-201ENST00000518956 587 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.14□□□□□ -1.91
CLDN9O95484 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 AC006518.1-201ENST00000541449 943 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 HIGD1AP1-201ENST00000550979 275 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.14□□□□□ -1.91
CLDN9O95484 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 AC090330.1-201ENST00000588646 764 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.14□□□□□ -1.91
CLDN9O95484 SRGNP1-201ENST00000603392 451 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC124312.4-201ENST00000605533 310 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC120053.1-201ENST00000607706 736 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AP005137.2-201ENST00000609238 400 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AL591516.1-201ENST00000611326 274 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 VN1R7P-201ENST00000619242 903 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 PLCE1P1-201ENST00000622094 305 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AC068880.4-201ENST00000623082 495 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 AL512506.2-201ENST00000624472 458 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLDN9O95484 AL645568.2-201ENST00000432815 1337 ntBASIC3.14□□□□□ -1.91
CLDN9O95484 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.14□□□□□ -1.91
CLDN9O95484 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.14□□□□□ -1.91
CLDN9O95484 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.13□□□□□ -1.91
CLDN9O95484 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 RNA5SP295-201ENST00000362655 121 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 SNORA63.3-201ENST00000362682 132 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 RNA5SP119-201ENST00000362715 117 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CLDN9O95484 RNU6-712P-201ENST00000410558 100 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN9O95484 OR1AA1P-201ENST00000419597 916 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN9O95484 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN9O95484 RPL23AP22-201ENST00000437556 453 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN9O95484 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 RPS4XP10-201ENST00000465034 731 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 GAPDHP39-201ENST00000481866 979 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.13□□□□□ -1.91
CLDN9O95484 KCTD9P5-201ENST00000504141 1170 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AC021678.1-201ENST00000505195 936 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 NAMPTP2-201ENST00000505629 1115 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 TXNP6-201ENST00000510190 310 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 RNU1-143P-201ENST00000516296 146 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.13□□□□□ -1.91
CLDN9O95484 AP001207.2-201ENST00000519490 539 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AC019227.1-201ENST00000526902 510 ntBASIC3.13□□□□□ -1.91
CLDN9O95484 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.13□□□□□ -1.91
CLDN9O95484 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.13□□□□□ -1.91
CLDN9O95484 AC126177.3-201ENST00000551839 688 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms