Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKNO60260 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKNO60260 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
PRKNO60260 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
PRKNO60260 AL136964.1-201ENST00000622038 2990 ntBASIC3.6□□□□□ -1.83
PRKNO60260 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 MTCO1P23-201ENST00000415223 1526 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 RNA5SP502-201ENST00000362694 119 ntBASIC3.6□□□□□ -1.83
PRKNO60260 RNU6-501P-201ENST00000364072 100 ntBASIC3.6□□□□□ -1.83
PRKNO60260 Y_RNA.559-201ENST00000384686 107 ntBASIC3.6□□□□□ -1.83
PRKNO60260 SSXP10-201ENST00000402595 565 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AL445189.1-201ENST00000405722 338 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AL160275.2-201ENST00000412010 394 ntBASIC3.6□□□□□ -1.83
PRKNO60260 HMGB1P11-201ENST00000413899 637 ntBASIC3.6□□□□□ -1.83
PRKNO60260 MTCO2P34-201ENST00000421994 607 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC006366.1-201ENST00000422002 759 ntBASIC3.6□□□□□ -1.83
PRKNO60260 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.6□□□□□ -1.83
PRKNO60260 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.6□□□□□ -1.83
PRKNO60260 AL445584.1-201ENST00000431451 330 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.6□□□□□ -1.83
PRKNO60260 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.6□□□□□ -1.83
PRKNO60260 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.6□□□□□ -1.83
PRKNO60260 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 RPS17P13-201ENST00000448974 407 ntBASIC3.6□□□□□ -1.83
PRKNO60260 TRBV26-201ENST00000456572 344 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC026410.2-201ENST00000460281 156 ntBASIC3.6□□□□□ -1.83
PRKNO60260 RN7SL542P-201ENST00000467147 294 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AL136126.1-201ENST00000473603 402 ntBASIC3.6□□□□□ -1.83
PRKNO60260 S100A11P1-201ENST00000477525 312 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC114981.1-201ENST00000503897 678 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC004069.2-201ENST00000505438 1114 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC022447.1-201ENST00000515358 464 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC093853.1-201ENST00000515689 483 ntBASIC3.6□□□□□ -1.83
PRKNO60260 RNA5SP216-201ENST00000516111 123 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.6□□□□□ -1.83
PRKNO60260 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.6□□□□□ -1.83
PRKNO60260 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.6□□□□□ -1.83
PRKNO60260 PCMTD1P2-201ENST00000565017 355 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC141257.3-201ENST00000572906 215 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AP001004.1-201ENST00000582468 324 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.6□□□□□ -1.83
PRKNO60260 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.6□□□□□ -1.83
PRKNO60260 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.6□□□□□ -1.83
PRKNO60260 AC113194.1-201ENST00000606037 500 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AL139286.2-201ENST00000606838 396 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC103710.4-201ENST00000609301 899 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC009878.1-201ENST00000621819 340 ntBASIC3.6□□□□□ -1.83
PRKNO60260 AC092656.1-203ENST00000624134 423 ntBASIC3.6□□□□□ -1.83
PRKNO60260 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.6□□□□□ -1.83
PRKNO60260 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.6□□□□□ -1.83
PRKNO60260 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
PRKNO60260 ELL2P4-201ENST00000446870 1376 ntBASIC3.6□□□□□ -1.83
PRKNO60260 DDX43P2-201ENST00000604753 1354 ntBASIC3.6□□□□□ -1.83
PRKNO60260 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC3.59□□□□□ -1.83
PRKNO60260 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.59□□□□□ -1.83
PRKNO60260 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRKNO60260 RNA5SP97-201ENST00000365006 84 ntBASIC3.59□□□□□ -1.83
PRKNO60260 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 U1.1-201ENST00000384101 164 ntBASIC3.59□□□□□ -1.83
PRKNO60260 DHFRP6-201ENST00000401776 268 ntBASIC3.59□□□□□ -1.83
PRKNO60260 RPS15AP40-201ENST00000419621 391 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 AL365184.2-201ENST00000431139 435 ntBASIC3.59□□□□□ -1.83
PRKNO60260 RPS6P12-201ENST00000432491 726 ntBASIC3.59□□□□□ -1.83
PRKNO60260 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.59□□□□□ -1.83
PRKNO60260 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 COX6CP12-201ENST00000446748 202 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.59□□□□□ -1.83
PRKNO60260 AC104073.1-201ENST00000451988 151 ntBASIC3.59□□□□□ -1.83
PRKNO60260 RNU7-136P-201ENST00000458819 69 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 AL139099.1-201ENST00000497398 403 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC108941.1-201ENST00000502853 530 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.59□□□□□ -1.83
PRKNO60260 AC020593.1-201ENST00000507399 299 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.59□□□□□ -1.83
PRKNO60260 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.59□□□□□ -1.83
PRKNO60260 MTND5P4-201ENST00000514978 288 ntBASIC3.59□□□□□ -1.83
PRKNO60260 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.59□□□□□ -1.83
PRKNO60260 RNA5SP208-201ENST00000516156 78 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.8 ms