Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.96□□□□□ -2.1
SSSCA1O60232 AC078814.3-201ENST00000553036 491 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 RPL23AP84-201ENST00000571193 464 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC1.96□□□□□ -2.1
SSSCA1O60232 AC024560.3-201ENST00000608482 349 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 AC011890.2-201ENST00000613393 294 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SSSCA1O60232 MIR4496-201ENST00000635896 61 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 AC093536.2-201ENST00000565257 1406 ntBASIC1.96□□□□□ -2.1
SSSCA1O60232 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SSSCA1O60232 AC091564.4-201ENST00000533934 2194 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
SSSCA1O60232 MTCO1P24-201ENST00000515438 1558 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC012321.1-201ENST00000561622 1588 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 RNA5SP391-201ENST00000363456 119 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
SSSCA1O60232 RNU4-65P-201ENST00000410473 140 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 RNU2-25P-201ENST00000411041 191 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC1.95□□□□□ -2.1
SSSCA1O60232 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.95□□□□□ -2.1
SSSCA1O60232 AC073508.1-201ENST00000428866 656 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC023347.2-201ENST00000433994 462 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC1.95□□□□□ -2.1
SSSCA1O60232 RPS15AP7-201ENST00000439294 405 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.95□□□□□ -2.1
SSSCA1O60232 LINC00888-204ENST00000487386 421 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC107222.1-201ENST00000510899 637 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC096725.1-201ENST00000514266 313 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 SNORA67.7-201ENST00000516664 135 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 RN7SKP277-201ENST00000516895 283 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 NPM1P52-201ENST00000518264 846 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC1.95□□□□□ -2.1
SSSCA1O60232 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SSSCA1O60232 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.95□□□□□ -2.1
SSSCA1O60232 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.95□□□□□ -2.1
SSSCA1O60232 AC005412.1-201ENST00000580812 1049 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC008687.2-201ENST00000597865 520 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AL590282.1-201ENST00000610379 1136 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC008083.4-201ENST00000615076 444 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC015726.3-201ENST00000624501 418 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC026951.1-201ENST00000559530 2459 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
SSSCA1O60232 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.95□□□□□ -2.1
SSSCA1O60232 PABPC1P9-201ENST00000426076 1612 ntBASIC1.95□□□□□ -2.1
SSSCA1O60232 AC026241.1-201ENST00000517873 2142 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSSCA1O60232 ZNF720P1-201ENST00000562403 1939 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSSCA1O60232 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SSSCA1O60232 5S_rRNA.1-201ENST00000364415 116 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC1.94□□□□□ -2.1
SSSCA1O60232 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSSCA1O60232 DHFRP5-201ENST00000406944 564 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AL389915.1-201ENST00000422463 466 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 YME1L1P1-201ENST00000429435 297 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.94□□□□□ -2.1
SSSCA1O60232 PSMA2P3-201ENST00000429685 675 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.94□□□□□ -2.1
SSSCA1O60232 SNRPEP4-201ENST00000435815 279 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 TPMTP4-201ENST00000450749 678 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 HMGB1P15-201ENST00000453854 435 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 TRBV26-201ENST00000456572 344 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 FAM133DP-201ENST00000464802 691 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 RPS23P3-201ENST00000470993 430 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC1.94□□□□□ -2.1
SSSCA1O60232 VN1R104P-201ENST00000505115 1009 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC005351.1-201ENST00000511152 786 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.94□□□□□ -2.1
SSSCA1O60232 CIR1P1-201ENST00000524055 1133 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC022690.1-201ENST00000526681 550 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AL391156.1-201ENST00000554965 554 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AL049874.4-201ENST00000557593 255 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.94□□□□□ -2.1
SSSCA1O60232 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.94□□□□□ -2.1
SSSCA1O60232 AC115085.1-201ENST00000588924 229 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC008739.3-201ENST00000603262 127 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AC055764.2-201ENST00000610089 670 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 AL110115.1-201ENST00000614396 364 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 U4.3-201ENST00000621047 82 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.94□□□□□ -2.1
SSSCA1O60232 MTND5P1-201ENST00000445440 1375 ntBASIC1.94□□□□□ -2.1
SSSCA1O60232 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SSSCA1O60232 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.94□□□□□ -2.1
SSSCA1O60232 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SSSCA1O60232 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.93□□□□□ -2.1
SSSCA1O60232 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSSCA1O60232 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSSCA1O60232 AL139276.1-201ENST00000311910 1001 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SSSCA1O60232 RNU6-859P-201ENST00000362728 107 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSSCA1O60232 ATP5F1P3-201ENST00000397213 657 ntBASIC1.93□□□□□ -2.1
SSSCA1O60232 AL139039.1-201ENST00000401900 692 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms