Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC6.59□□□□□ -1.35
ACTN4O43707 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
ACTN4O43707 RPL23AP84-201ENST00000571193 464 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 BX284668.6-201ENST00000606899 438 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 AL133481.2-203ENST00000607558 139 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.59□□□□□ -1.35
ACTN4O43707 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.59□□□□□ -1.35
ACTN4O43707 SDR42E1P1-201ENST00000611327 477 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 AC073869.10-201ENST00000642016 354 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.59□□□□□ -1.35
ACTN4O43707 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.59□□□□□ -1.35
ACTN4O43707 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 AC011933.2-201ENST00000578539 2790 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 AC007342.5-201ENST00000571340 2142 ntBASIC6.59□□□□□ -1.35
ACTN4O43707 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.59□□□□□ -1.35
ACTN4O43707 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6.59□□□□□ -1.35
ACTN4O43707 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.59□□□□□ -1.35
ACTN4O43707 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
ACTN4O43707 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.59□□□□□ -1.36
ACTN4O43707 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
ACTN4O43707 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.59□□□□□ -1.36
ACTN4O43707 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ACTN4O43707 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
ACTN4O43707 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ACTN4O43707 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
ACTN4O43707 Y_RNA.122-201ENST00000363331 96 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 Y_RNA.183-201ENST00000363882 113 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RNU6-740P-201ENST00000364734 105 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ACTN4O43707 RNA5SP91-201ENST00000390902 119 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RNU6-493P-201ENST00000391321 108 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 MIR1298-201ENST00000408783 112 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RN7SKP86-201ENST00000410454 332 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RN7SKP17-201ENST00000411242 351 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AMMECR1LP1-201ENST00000415152 841 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 UBE2D3P2-201ENST00000424409 445 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 UBE2V1P4-201ENST00000425374 344 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 CRIP1P1-201ENST00000427567 185 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 PNKDP1-201ENST00000435914 430 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC005094.1-201ENST00000440420 368 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RPL7P49-201ENST00000471402 708 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC044810.1-201ENST00000480271 711 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.58□□□□□ -1.36
ACTN4O43707 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.58□□□□□ -1.36
ACTN4O43707 IGKV1OR2-1-201ENST00000514060 354 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC109329.1-201ENST00000518744 317 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC144568.1-201ENST00000520139 137 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.58□□□□□ -1.36
ACTN4O43707 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.58□□□□□ -1.36
ACTN4O43707 AC091078.2-201ENST00000557145 559 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 MIR4504-201ENST00000577413 92 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 MIR4293-201ENST00000584305 78 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 IGKV1OR2-118-201ENST00000603238 347 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ACTN4O43707 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ACTN4O43707 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.58□□□□□ -1.36
ACTN4O43707 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ACTN4O43707 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC6.58□□□□□ -1.36
ACTN4O43707 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ACTN4O43707 MFSD8-219ENST00000641228 2559 ntBASIC6.58□□□□□ -1.36
ACTN4O43707 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.57□□□□□ -1.36
ACTN4O43707 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
ACTN4O43707 AC232271.1-201ENST00000602455 2715 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ACTN4O43707 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 Y_RNA.83-201ENST00000363005 113 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 RN7SKP171-201ENST00000364417 303 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 Y_RNA.269-201ENST00000364685 89 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 Y_RNA.277-201ENST00000364754 102 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 MIR625-201ENST00000385047 85 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 MRPL35P1-201ENST00000404272 572 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 RNU6-121P-201ENST00000410525 99 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 SYF2P2-201ENST00000417620 583 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 AC110602.1-201ENST00000437414 318 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC6.57□□□□□ -1.36
ACTN4O43707 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 FABP5P13-201ENST00000452144 328 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms