Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 SNRPEP7-201ENST00000438350 220 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.39□□□□□ -1.55
SRGAP3O43295 AL161747.1-201ENST00000480068 358 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 MTCO3P9-201ENST00000506989 781 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.39□□□□□ -1.55
SRGAP3O43295 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC5.39□□□□□ -1.55
SRGAP3O43295 AC006499.2-201ENST00000513470 337 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 RNU2-46P-201ENST00000517038 113 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.39□□□□□ -1.55
SRGAP3O43295 COX6B1P6-201ENST00000522347 255 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRGAP3O43295 AP000790.1-201ENST00000528891 737 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AP003122.4-201ENST00000530980 758 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 HIF1AP1-201ENST00000553642 175 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.39□□□□□ -1.55
SRGAP3O43295 HMGN1P30-201ENST00000589286 268 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 TPMTP1-201ENST00000592307 737 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC5.39□□□□□ -1.55
SRGAP3O43295 AC245014.2-201ENST00000603689 287 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC246785.4-201ENST00000605374 287 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC011816.2-201ENST00000607089 556 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AC009233.1-201ENST00000616477 371 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 AL732618.1-201ENST00000623251 301 ntBASIC5.39□□□□□ -1.55
SRGAP3O43295 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SRGAP3O43295 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.39□□□□□ -1.55
SRGAP3O43295 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SRGAP3O43295 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
SRGAP3O43295 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SRGAP3O43295 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
SRGAP3O43295 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AC092435.4-201ENST00000623012 4159 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 GNG5P1-201ENST00000255500 204 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 Y_RNA.162-201ENST00000363683 102 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 RNU6-317P-201ENST00000384031 107 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 MIR1302-11-201ENST00000408051 138 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 MIR1302-9-201ENST00000408365 138 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 MIR1302-10-201ENST00000408734 138 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AC017078.1-201ENST00000416146 368 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.38□□□□□ -1.55
SRGAP3O43295 RPL22P17-201ENST00000438729 315 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 SDCBPP1-201ENST00000440192 890 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.38□□□□□ -1.55
SRGAP3O43295 MTND4P19-201ENST00000446659 478 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 RN7SL817P-201ENST00000480777 288 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AC012158.1-204ENST00000483430 465 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 DEFB109F-201ENST00000491870 277 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 RN7SL691P-201ENST00000494487 301 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 HMGN1P13-201ENST00000505795 138 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRGAP3O43295 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AF279873.1-201ENST00000523393 313 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.38□□□□□ -1.55
SRGAP3O43295 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SRGAP3O43295 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.38□□□□□ -1.55
SRGAP3O43295 MIR3138-201ENST00000585238 82 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AL391646.1-201ENST00000603860 190 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AL359999.1-201ENST00000604513 294 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 MIR1302-2-201ENST00000607096 138 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AC083809.1-201ENST00000615051 472 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
SRGAP3O43295 AL445363.3-201ENST00000623080 671 ntBASIC5.38□□□□□ -1.55
SRGAP3O43295 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC5.38□□□□□ -1.55
SRGAP3O43295 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRGAP3O43295 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SRGAP3O43295 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
SRGAP3O43295 AC005261.2-201ENST00000593427 4258 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SRGAP3O43295 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SRGAP3O43295 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.37□□□□□ -1.55
SRGAP3O43295 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SRGAP3O43295 RNU6-289P-201ENST00000364093 107 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 RNU6-1151P-201ENST00000384684 107 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AL049693.1-201ENST00000402760 611 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AL603766.1-201ENST00000407763 664 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC5.37□□□□□ -1.55
SRGAP3O43295 AL157831.1-201ENST00000426134 473 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 AC073069.1-201ENST00000428657 441 ntBASIC5.37□□□□□ -1.55
SRGAP3O43295 ATP5HP2-201ENST00000433885 485 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms