Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 RNU6-430P-201ENST00000517078 107 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AF186190.1-201ENST00000517470 480 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 OR5D15P-201ENST00000531671 942 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.41□□□□□ -1.7
PHGDHO43175 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC4.41□□□□□ -1.7
PHGDHO43175 AC068790.3-201ENST00000602988 553 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC013476.2-201ENST00000614456 459 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 AC112204.3-201ENST00000623822 332 ntBASIC4.41□□□□□ -1.7
PHGDHO43175 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
PHGDHO43175 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHGDHO43175 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.4□□□□□ -1.7
PHGDHO43175 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHGDHO43175 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PHGDHO43175 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.4□□□□□ -1.7
PHGDHO43175 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
PHGDHO43175 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PHGDHO43175 SNORA58B-201ENST00000364259 136 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 Y_RNA.516-201ENST00000384541 124 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 MIR550A3-201ENST00000390735 95 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PHGDHO43175 RNU6-712P-201ENST00000410558 100 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 RN7SKP216-201ENST00000411050 312 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AC016769.2-201ENST00000414815 475 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.4□□□□□ -1.71
PHGDHO43175 AL589872.1-201ENST00000426602 288 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 ISCA1P6-201ENST00000427740 390 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AC011753.3-201ENST00000443436 406 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.4□□□□□ -1.71
PHGDHO43175 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PHGDHO43175 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.4□□□□□ -1.71
PHGDHO43175 AC055855.1-201ENST00000489563 579 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHGDHO43175 AC012170.1-201ENST00000495139 359 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.4□□□□□ -1.71
PHGDHO43175 NDUFA5P12-201ENST00000503796 343 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 RNU6-528P-201ENST00000516926 100 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AP001781.1-201ENST00000530977 207 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHGDHO43175 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.4□□□□□ -1.71
PHGDHO43175 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.4□□□□□ -1.71
PHGDHO43175 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.4□□□□□ -1.71
PHGDHO43175 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.4□□□□□ -1.71
PHGDHO43175 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.4□□□□□ -1.71
PHGDHO43175 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.4□□□□□ -1.71
PHGDHO43175 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.4□□□□□ -1.71
PHGDHO43175 DUXAP4-201ENST00000603046 613 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AL161729.4-201ENST00000604650 476 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 BX664608.1-201ENST00000610519 487 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 AC091304.9-201ENST00000612091 226 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PHGDHO43175 AC099654.12-201ENST00000639868 649 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PHGDHO43175 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PHGDHO43175 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PHGDHO43175 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PHGDHO43175 MTND5P26-201ENST00000426018 1752 ntBASIC4.4□□□□□ -1.71
PHGDHO43175 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PHGDHO43175 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PHGDHO43175 RNA5SP52-201ENST00000362448 134 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RNU6-1078P-201ENST00000364522 103 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RNU6-1279P-201ENST00000383917 103 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 SDHCP2-201ENST00000398565 501 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 MIR298-201ENST00000401212 88 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 SNORA74C-2-201ENST00000411179 201 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RNU6-195P-201ENST00000411352 109 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 BX295541.1-201ENST00000417774 250 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC233728.2-201ENST00000425348 757 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC4.39□□□□□ -1.71
PHGDHO43175 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 MTND1P9-201ENST00000453775 944 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC092324.1-201ENST00000468671 324 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RN7SL826P-201ENST00000479724 288 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RPL9P33-201ENST00000484311 566 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC093270.2-201ENST00000486157 792 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC231760.1-201ENST00000498002 260 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC105252.1-201ENST00000503089 286 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 PPBPP1-201ENST00000510807 373 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 RNA5SP497-201ENST00000516081 97 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PHGDHO43175 MTCO2P4-201ENST00000517968 247 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.39□□□□□ -1.71
PHGDHO43175 DEFB109D-201ENST00000529497 240 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.39□□□□□ -1.71
PHGDHO43175 AC016957.1-201ENST00000534895 309 ntBASIC4.39□□□□□ -1.71
PHGDHO43175 AC126177.3-201ENST00000551839 688 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 111.3 ms