Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC006378.2-201ENST00000623178 2476 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 RNU6-339P-201ENST00000384310 107 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HMGB3O15347 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HMGB3O15347 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC092447.6-201ENST00000414578 210 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AL137014.1-201ENST00000420490 1226 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMGB3O15347 AC004975.1-201ENST00000428733 208 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HMGB3O15347 Z95327.1-201ENST00000446082 482 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.26□□□□□ -2.05
HMGB3O15347 RPL30P14-201ENST00000482744 348 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 CDC42P4-201ENST00000510507 563 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 MTCO3P44-201ENST00000510977 541 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 HMGB1P23-201ENST00000518743 568 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC092470.1-201ENST00000546187 132 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB3O15347 EIF5A2P1-201ENST00000564027 460 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC090666.1-201ENST00000578241 445 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.26□□□□□ -2.05
HMGB3O15347 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB3O15347 AC008687.2-201ENST00000597865 520 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 CKS1BP3-201ENST00000600888 237 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 MTCO3P22-201ENST00000603219 784 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AL137843.1-201ENST00000605078 385 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC005046.1-201ENST00000608515 625 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.26□□□□□ -2.05
HMGB3O15347 MIR378J-201ENST00000611988 109 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC244100.1-202ENST00000621554 382 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC091953.5-201ENST00000622919 233 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AC018692.3-201ENST00000623929 123 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 AL121594.5-201ENST00000631724 573 ntBASIC2.26□□□□□ -2.05
HMGB3O15347 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HMGB3O15347 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HMGB3O15347 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HMGB3O15347 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGB3O15347 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGB3O15347 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
HMGB3O15347 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 DEFA7P-201ENST00000382676 285 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 SNORA1.3-201ENST00000384676 136 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AL139095.1-201ENST00000404326 391 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 LINC01347-201ENST00000417964 355 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.25□□□□□ -2.05
HMGB3O15347 AC097713.2-201ENST00000430199 356 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC006028.1-201ENST00000438379 402 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 RPL37P4-201ENST00000448908 268 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC009220.1-201ENST00000451614 275 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 RPL32P34-201ENST00000486380 400 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC096751.1-202ENST00000502691 1067 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 C1DP5-201ENST00000525775 383 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.25□□□□□ -2.05
HMGB3O15347 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.25□□□□□ -2.05
HMGB3O15347 AC005242.1-201ENST00000585658 438 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 RPL12P50-201ENST00000603116 116 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 RPL23AP92-201ENST00000603609 255 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AP000787.2-201ENST00000604432 568 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC245389.1-201ENST00000605141 529 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AC128687.1-201ENST00000605304 619 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGB3O15347 AC140725.3-201ENST00000616193 880 ntBASIC2.25□□□□□ -2.05
HMGB3O15347 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGB3O15347 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
HMGB3O15347 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HMGB3O15347 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.25□□□□□ -2.05
HMGB3O15347 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
HMGB3O15347 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
HMGB3O15347 RNU6-1249P-201ENST00000363237 111 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 SNORA7.4-201ENST00000384249 137 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 MIR627-201ENST00000384979 97 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 RPS4XP3-201ENST00000398541 413 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC092638.1-201ENST00000411966 1275 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB3O15347 AC245052.5-201ENST00000416320 649 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB3O15347 RPS3AP9-201ENST00000417027 792 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.24□□□□□ -2.05
HMGB3O15347 AL353678.1-201ENST00000422735 741 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.24□□□□□ -2.05
HMGB3O15347 RPL23AP74-201ENST00000437246 471 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AL513043.1-201ENST00000439124 535 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 ST13P20-201ENST00000447996 1065 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 NUTF2P7-201ENST00000453086 375 ntBASIC2.24□□□□□ -2.05
HMGB3O15347 AP000705.1-201ENST00000454567 350 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms