Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 SDCBPP3-201ENST00000419629 891 ntBASIC3.4□□□□□ -1.87
CHD2O14647 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD2O14647 AC126182.1-201ENST00000478134 357 ntBASIC3.4□□□□□ -1.87
CHD2O14647 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD2O14647 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD2O14647 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD2O14647 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.4□□□□□ -1.87
CHD2O14647 AC107294.3-201ENST00000609211 526 ntBASIC3.4□□□□□ -1.87
CHD2O14647 AL136981.2-201ENST00000617319 734 ntBASIC3.4□□□□□ -1.87
CHD2O14647 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.4□□□□□ -1.87
CHD2O14647 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD2O14647 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD2O14647 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CHD2O14647 Y_RNA.4-201ENST00000362333 112 ntBASIC3.39□□□□□ -1.87
CHD2O14647 RNU6-1251P-201ENST00000364502 107 ntBASIC3.39□□□□□ -1.87
CHD2O14647 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CHD2O14647 RNA5SP498-201ENST00000411342 120 ntBASIC3.39□□□□□ -1.87
CHD2O14647 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD2O14647 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.39□□□□□ -1.87
CHD2O14647 BUD31P2-201ENST00000449374 300 ntBASIC3.39□□□□□ -1.87
CHD2O14647 HMGB3P21-201ENST00000452483 547 ntBASIC3.39□□□□□ -1.87
CHD2O14647 RNU6-1218P-201ENST00000458990 108 ntBASIC3.39□□□□□ -1.87
CHD2O14647 AC108860.1-201ENST00000484521 383 ntBASIC3.39□□□□□ -1.87
CHD2O14647 FAM172BP-201ENST00000487497 1089 ntBASIC3.39□□□□□ -1.87
CHD2O14647 EIF4EP5-201ENST00000528228 640 ntBASIC3.39□□□□□ -1.87
CHD2O14647 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.39□□□□□ -1.87
CHD2O14647 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHD2O14647 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
CHD2O14647 OR4G2P-202ENST00000641004 1759 ntBASIC3.38□□□□□ -1.87
CHD2O14647 GTF2H2B-203ENST00000508065 1432 ntBASIC3.38□□□□□ -1.87
CHD2O14647 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CHD2O14647 RN7SKP44-201ENST00000363602 316 ntBASIC3.38□□□□□ -1.87
CHD2O14647 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD2O14647 RN7SKP123-201ENST00000410732 291 ntBASIC3.38□□□□□ -1.87
CHD2O14647 RPL23AP11-201ENST00000475260 469 ntBASIC3.38□□□□□ -1.87
CHD2O14647 RPL23AP44-201ENST00000482216 473 ntBASIC3.38□□□□□ -1.87
CHD2O14647 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD2O14647 RNA5SP281-201ENST00000516504 135 ntBASIC3.38□□□□□ -1.87
CHD2O14647 AC021269.2-201ENST00000532318 330 ntBASIC3.38□□□□□ -1.87
CHD2O14647 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.38□□□□□ -1.87
CHD2O14647 AADACP1-206ENST00000561502 1193 ntBASIC3.38□□□□□ -1.87
CHD2O14647 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.38□□□□□ -1.87
CHD2O14647 AC046143.2-201ENST00000609789 160 ntBASIC3.38□□□□□ -1.87
CHD2O14647 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD2O14647 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CHD2O14647 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD2O14647 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CHD2O14647 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CHD2O14647 EIF5P1-201ENST00000400019 1231 ntBASIC3.37□□□□□ -1.87
CHD2O14647 GSTA9P-201ENST00000406231 611 ntBASIC3.37□□□□□ -1.87
CHD2O14647 MTCYBP7-201ENST00000419540 1134 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AC073464.3-201ENST00000422564 712 ntBASIC3.37□□□□□ -1.87
CHD2O14647 Z98742.2-201ENST00000431564 187 ntBASIC3.37□□□□□ -1.87
CHD2O14647 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD2O14647 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.37□□□□□ -1.87
CHD2O14647 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD2O14647 AC010627.1-201ENST00000503819 1294 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AC026436.1-201ENST00000510537 270 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD2O14647 AC022790.1-201ENST00000522872 204 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD2O14647 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD2O14647 MTCO3P13-201ENST00000577757 781 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AL355816.1-201ENST00000607951 118 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD2O14647 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHD2O14647 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD2O14647 AL021368.2-201ENST00000606125 5352 ntBASIC3.37□□□□□ -1.87
CHD2O14647 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.37□□□□□ -1.87
CHD2O14647 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHD2O14647 EXOC5P1-201ENST00000510543 1969 ntBASIC3.37□□□□□ -1.87
CHD2O14647 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC3.37□□□□□ -1.87
CHD2O14647 CEACAMP4-201ENST00000457676 421 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.37□□□□□ -1.87
CHD2O14647 CCNHP1-201ENST00000513311 678 ntBASIC3.37□□□□□ -1.87
CHD2O14647 ACTR6P1-201ENST00000514311 1104 ntBASIC3.37□□□□□ -1.87
CHD2O14647 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.37□□□□□ -1.87
CHD2O14647 AC090819.1-201ENST00000523800 1111 ntBASIC3.37□□□□□ -1.87
CHD2O14647 PDCD5P1-201ENST00000543528 309 ntBASIC3.37□□□□□ -1.87
CHD2O14647 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CHD2O14647 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CHD2O14647 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.36□□□□□ -1.87
CHD2O14647 SNORD65-201ENST00000391079 73 ntBASIC3.36□□□□□ -1.87
CHD2O14647 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD2O14647 AC093716.1-201ENST00000435923 377 ntBASIC3.36□□□□□ -1.87
CHD2O14647 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.36□□□□□ -1.87
CHD2O14647 AC104389.3-201ENST00000445629 235 ntBASIC3.36□□□□□ -1.87
CHD2O14647 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 RNU6-347P-201ENST00000516658 105 ntBASIC3.36□□□□□ -1.87
CHD2O14647 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 AC018630.1-201ENST00000541376 925 ntBASIC3.36□□□□□ -1.87
CHD2O14647 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 AC016727.1-205ENST00000605437 569 ntBASIC3.36□□□□□ -1.87
CHD2O14647 AL133412.1-201ENST00000380194 2992 ntBASIC3.36□□□□□ -1.87
CHD2O14647 AC009487.4-201ENST00000624969 3585 ntBASIC3.36□□□□□ -1.87
CHD2O14647 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CHD2O14647 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CHD2O14647 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms