Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 RNU6-98P-201ENST00000384173 107 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AL138827.1-201ENST00000402666 306 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AL354719.1-201ENST00000406535 843 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 MTATP6P31-201ENST00000406985 692 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.61□□□□□ -1.99
UBFD1O14562 YPEL5P1-201ENST00000419731 367 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AL590103.1-201ENST00000434488 307 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.61□□□□□ -1.99
UBFD1O14562 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.61□□□□□ -1.99
UBFD1O14562 RSL24D1P2-201ENST00000445584 366 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 HMGB1P25-201ENST00000468402 607 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC004924.1-201ENST00000480160 781 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC025459.1-201ENST00000504072 156 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC010486.1-201ENST00000511793 424 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.61□□□□□ -1.99
UBFD1O14562 HAUS1P3-201ENST00000523909 662 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC239860.2-201ENST00000525886 270 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC022387.2-201ENST00000604050 448 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC008277.2-201ENST00000605196 797 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AL359198.2-201ENST00000611836 194 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 AC231759.1-201ENST00000616455 597 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC103988.1-201ENST00000566382 2177 ntBASIC2.61□□□□□ -1.99
UBFD1O14562 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
UBFD1O14562 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.61□□□□□ -1.99
UBFD1O14562 AC010733.2-201ENST00000589496 5702 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC002546.1-201ENST00000588041 2504 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBFD1O14562 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.6□□□□□ -1.99
UBFD1O14562 RNU6-1293P-201ENST00000384077 107 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 MIR7-1-201ENST00000384871 110 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 MIR592-201ENST00000384959 97 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 MTCO3P4-201ENST00000419236 787 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC023347.2-201ENST00000433994 462 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.6□□□□□ -1.99
UBFD1O14562 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.6□□□□□ -1.99
UBFD1O14562 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.6□□□□□ -1.99
UBFD1O14562 RN7SL429P-201ENST00000479090 223 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 RN7SL489P-201ENST00000486185 223 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 RN7SL327P-201ENST00000488659 223 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.6□□□□□ -1.99
UBFD1O14562 AC111000.2-201ENST00000507775 550 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC010306.1-201ENST00000523223 1117 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 MTND2P26-201ENST00000528255 1029 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 SETP2-201ENST00000553886 926 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AL359535.1-201ENST00000612100 1087 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 RN7SL853P-201ENST00000617250 223 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.6□□□□□ -1.99
UBFD1O14562 RNU6-156P-201ENST00000621869 107 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 AC090617.7-201ENST00000623952 126 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
UBFD1O14562 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
UBFD1O14562 SAGE4P-201ENST00000442271 3381 ntBASIC2.6□□□□□ -1.99
UBFD1O14562 ZNF33CP-201ENST00000432492 2030 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.59□□□□□ -1.99
UBFD1O14562 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBFD1O14562 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBFD1O14562 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
UBFD1O14562 FTLP6-201ENST00000355274 422 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
UBFD1O14562 RNU6-356P-201ENST00000384140 107 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
UBFD1O14562 RNA5SP210-201ENST00000391034 120 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AL590290.1-201ENST00000405336 380 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 RPS20P25-201ENST00000412447 352 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.59□□□□□ -1.99
UBFD1O14562 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.59□□□□□ -1.99
UBFD1O14562 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.59□□□□□ -1.99
UBFD1O14562 AC109583.1-201ENST00000432156 268 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AL135938.1-201ENST00000443141 297 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.59□□□□□ -1.99
UBFD1O14562 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 OR6K1P-201ENST00000456766 971 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC133134.1-201ENST00000466800 359 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 VN1R104P-201ENST00000505115 1009 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 ARL4AP2-201ENST00000507378 601 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC098799.2-201ENST00000509466 868 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 RNU6-889P-201ENST00000517189 103 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 OR7K1P-201ENST00000546439 926 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC123904.3-201ENST00000547218 814 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 MTCO3P24-201ENST00000572729 782 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 MIR4635-201ENST00000583759 79 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 AL392112.1-201ENST00000605115 829 ntBASIC2.59□□□□□ -1.99
UBFD1O14562 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.59□□□□□ -1.99
UBFD1O14562 AC233263.6-201ENST00000631132 1963 ntBASIC2.59□□□□□ -2
UBFD1O14562 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.59□□□□□ -2
UBFD1O14562 MTND4P34-201ENST00000572715 1371 ntBASIC2.59□□□□□ -2
UBFD1O14562 AC009501.3-201ENST00000605001 1352 ntBASIC2.59□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 207.9 ms