Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 MTND5P29-201ENST00000458676 1807 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC025125.1-201ENST00000624743 1922 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 RNU6-457P-201ENST00000363999 107 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A5A8TX70 RNU4-62P-201ENST00000410125 130 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 RNA5SP107-201ENST00000411358 122 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC127526.1-201ENST00000417526 366 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 RPL7P54-201ENST00000438336 674 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AL450263.2-201ENST00000439400 589 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
COL6A5A8TX70 ACTR6P1-201ENST00000514311 1104 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.86□□□□□ -2.11
COL6A5A8TX70 RMST_8.1-201ENST00000610287 165 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 AC002064.3-201ENST00000623448 346 ntBASIC1.86□□□□□ -2.11
COL6A5A8TX70 CDC27P2-201ENST00000425026 1922 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 MIR1183-201ENST00000408856 89 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 RPL23AP76-201ENST00000441860 458 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC104090.1-201ENST00000506341 1171 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 RAC1P5-201ENST00000512182 576 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC005951.1-201ENST00000576706 485 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AP001521.1-201ENST00000609150 300 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 MIR6515-201ENST00000619843 57 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 SPATA2P1-201ENST00000431223 2055 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC004925.1-201ENST00000624256 2706 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC245100.2-201ENST00000454544 1679 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AC116158.1-201ENST00000560231 2129 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
COL6A5A8TX70 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 MIR148B-201ENST00000362252 99 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 RNU6-1032P-201ENST00000384100 107 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 RPL32P35-201ENST00000415214 394 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 SETP10-201ENST00000424368 814 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 FAR1P1-201ENST00000427163 934 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AL121594.1-201ENST00000475906 575 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 ARL2BPP6-201ENST00000512757 439 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 Y_RNA.681-201ENST00000516445 113 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 OR5D17P-201ENST00000531492 978 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 PDCL2P2-201ENST00000533651 189 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 AL355493.4-201ENST00000618530 292 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.85□□□□□ -2.11
COL6A5A8TX70 OR1S1-201ENST00000624470 978 ntBASIC1.85□□□□□ -2.11
COL6A5A8TX70 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL6A5A8TX70 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.84□□□□□ -2.11
COL6A5A8TX70 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.84□□□□□ -2.11
COL6A5A8TX70 SNORA41-201ENST00000384675 132 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 AMD1P2-201ENST00000412936 992 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 RPL31P12-201ENST00000422587 358 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 HMGB1P25-201ENST00000468402 607 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC1.84□□□□□ -2.11
COL6A5A8TX70 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.84□□□□□ -2.11
COL6A5A8TX70 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.84□□□□□ -2.11
COL6A5A8TX70 AC008507.1-201ENST00000587506 734 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 AC078899.5-201ENST00000612475 178 ntBASIC1.84□□□□□ -2.11
COL6A5A8TX70 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
COL6A5A8TX70 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
COL6A5A8TX70 AC007342.7-201ENST00000624610 2337 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 AL355578.1-201ENST00000607405 1328 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
COL6A5A8TX70 SNORA11.4-201ENST00000408823 129 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 TPMTP3-201ENST00000411928 735 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.84□□□□□ -2.12
COL6A5A8TX70 AC021269.2-201ENST00000532318 330 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.84□□□□□ -2.12
COL6A5A8TX70 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.84□□□□□ -2.12
COL6A5A8TX70 RPS3AP4-201ENST00000555161 764 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC1.84□□□□□ -2.12
COL6A5A8TX70 MIR6504-201ENST00000613520 61 ntBASIC1.84□□□□□ -2.12
COL6A5A8TX70 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
COL6A5A8TX70 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A5A8TX70 MTND4P10-201ENST00000446199 1363 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A5A8TX70 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A5A8TX70 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.83□□□□□ -2.12
COL6A5A8TX70 RN7SKP140-201ENST00000411196 284 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 RNA5SP270-201ENST00000411361 118 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 AP1B1P2-201ENST00000416196 106 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC1.83□□□□□ -2.12
COL6A5A8TX70 AC092851.1-201ENST00000535964 478 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 RFPL1S-203ENST00000539579 330 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC1.83□□□□□ -2.12
COL6A5A8TX70 AC005730.3-201ENST00000583067 366 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.83□□□□□ -2.12
COL6A5A8TX70 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
COL6A5A8TX70 AC069528.2-201ENST00000624849 1991 ntBASIC1.83□□□□□ -2.12
COL6A5A8TX70 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms