Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.89-201ENST00000363031 102 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 RNU1-130P-201ENST00000363930 160 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 RNU6-534P-201ENST00000364877 106 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MIR513A2-201ENST00000385249 127 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 RN7SKP213-201ENST00000410746 298 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 RPL23AP27-201ENST00000415161 451 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AF186996.5-201ENST00000418098 904 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MTCO1P20-201ENST00000425366 358 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AL035410.1-201ENST00000427409 427 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 TDGF1P1-201ENST00000445734 527 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC139783.2-201ENST00000504847 1145 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC098799.2-201ENST00000509466 868 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC093853.1-201ENST00000515689 483 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.693-201ENST00000516641 110 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.704-201ENST00000516851 102 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 ADI1P3-201ENST00000549509 470 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC068446.3-201ENST00000555285 382 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AL512360.1-201ENST00000555346 234 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC025678.1-201ENST00000567861 338 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC099489.2-201ENST00000574976 260 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC012507.3-201ENST00000603556 477 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AL391646.1-201ENST00000603860 190 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC055876.5-201ENST00000605667 259 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 AC017083.3-201ENST00000609955 700 ntBASIC5.08□□□□□ -1.6
CCDC66A2RUB6 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CCDC66A2RUB6 ARHGAP42P3-201ENST00000443989 2508 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 LINC02471-203ENST00000641941 4752 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC138915.3-201ENST00000562908 1389 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RNU6-797P-201ENST00000363101 109 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RNU6-181P-201ENST00000363225 107 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.295-201ENST00000364918 102 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RNA5SP428-201ENST00000365129 132 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 SNORD82-201ENST00000365530 70 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 MIR921-201ENST00000401133 56 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC009237.5-201ENST00000414271 501 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 HMGB3P20-201ENST00000417997 600 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 PSMA6P3-201ENST00000428242 164 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AL136380.1-201ENST00000447970 162 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RN7SL319P-201ENST00000480656 221 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RPSAP50-201ENST00000481955 852 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC016065.2-201ENST00000514530 444 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RNU6-445P-201ENST00000516949 107 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 IGLV3-26-201ENST00000520756 302 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC090615.1-201ENST00000577519 154 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 MIR3691-201ENST00000578066 90 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC063943.3-201ENST00000615562 356 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC104985.2-201ENST00000620598 500 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AP006248.2-201ENST00000623309 592 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 AC074029.4-201ENST00000624796 1859 ntBASIC5.07□□□□□ -1.6
CCDC66A2RUB6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC66A2RUB6 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms