Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 snoU13.24-201ENST00000458998 104 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC103975.1-201ENST00000482506 483 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 CAB39P1-201ENST00000502277 460 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 PRELID3BP6-201ENST00000503839 571 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 HMGB1P22-201ENST00000505315 124 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC125494.3-201ENST00000602759 455 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC096577.2-201ENST00000611455 153 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC018692.3-201ENST00000623929 123 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC090617.7-201ENST00000623952 126 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC009039.2-201ENST00000624524 529 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 AC139713.2-210ENST00000641741 992 ntBASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.89□□□□□ -1.95
USH1CQ9Y6N9 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC046144.1-201ENST00000478559 1853 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC073346.2-201ENST00000624724 2058 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 MIR592-201ENST00000384959 97 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC092745.2-202ENST00000411880 369 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC109780.2-201ENST00000413467 845 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 RPF2P1-201ENST00000424137 906 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC109583.1-201ENST00000432156 268 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 RPS7P2-201ENST00000435134 607 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AL035407.2-201ENST00000454090 378 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC010285.1-201ENST00000470580 392 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC109925.1-201ENST00000478069 331 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 SNORA9.3-201ENST00000516383 129 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC012182.1-201ENST00000570133 895 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC005412.1-201ENST00000580812 1049 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 MIR3670-2-201ENST00000582974 65 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 MIR3670-1-201ENST00000584160 65 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 MIR3670-3-201ENST00000584855 65 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC012468.1-201ENST00000604888 430 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 MIR3670-4-201ENST00000612260 65 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 STMN1P1-201ENST00000617809 440 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AL355493.4-201ENST00000618530 292 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC024595.1-201ENST00000623088 387 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC090617.9-201ENST00000623751 147 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 AC017104.5-201ENST00000637647 639 ntBASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
USH1CQ9Y6N9 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 SNORD115-48-201ENST00000364764 76 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 MIR512-1-201ENST00000384913 84 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 MT-TC-201ENST00000387405 66 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RPL21P75-201ENST00000396599 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RPL21P28-201ENST00000401418 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AL592114.1-201ENST00000403842 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 Z75741.1-201ENST00000446793 314 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AL162389.1-201ENST00000449233 177 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 NPM1P13-201ENST00000452663 865 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RPL21P39-201ENST00000463605 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC011979.1-201ENST00000472300 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RPL21P93-201ENST00000480465 489 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC233702.1-201ENST00000482905 502 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC087190.1-201ENST00000484462 480 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC093591.1-201ENST00000491435 481 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RPL21P16-201ENST00000495531 483 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AL358832.1-201ENST00000497800 389 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RNA5SP468-201ENST00000516782 93 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 SNORA70.24-201ENST00000517233 118 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 RNU6-711P-201ENST00000517255 106 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC083923.1-201ENST00000523708 376 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 FAM60DP-201ENST00000524174 632 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC017100.2-201ENST00000584628 355 ntBASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.87□□□□□ -1.95
USH1CQ9Y6N9 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms