Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 HAUS6P2-201ENST00000433254 2404 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MIR26A1-201ENST00000362205 77 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AP006437.1-201ENST00000641440 3685 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 WWP1P1-201ENST00000466609 2769 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 SNORA9.1-201ENST00000362412 131 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 Y_RNA.572-201ENST00000384757 98 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL138827.1-201ENST00000402666 306 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 RNA5SP118-201ENST00000410385 109 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 RPL7P5-201ENST00000471472 736 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC011494.1-201ENST00000596454 237 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AL158062.1-201ENST00000619632 745 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 RNA5SP139-201ENST00000364340 117 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 Y_RNA.520-201ENST00000384556 102 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 RNU6-30P-201ENST00000384561 107 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 RNU6-1105P-201ENST00000384774 107 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MIR181B1-201ENST00000385240 110 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC244033.1-201ENST00000426826 870 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AP001086.1-201ENST00000494882 321 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LDHBP3-201ENST00000514909 822 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 OR5G4P-201ENST00000525251 760 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 Y_RNA.571-201ENST00000384753 98 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 TOMM22P6-201ENST00000465035 409 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 MLLT10P2-201ENST00000506434 249 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AP001804.3-201ENST00000525146 880 ntBASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC1.08□□□□□ -2.24
MACF1Q9UPN3 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC093909.5-201ENST00000621839 1799 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 RPS7P9-201ENST00000414704 586 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AL353597.2-202ENST00000434901 373 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC006539.3-201ENST00000454258 129 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 RNA5SP67-201ENST00000516422 131 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 MIR1273G-201ENST00000577677 100 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC103810.8-201ENST00000607347 118 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AL138713.1-201ENST00000624026 2130 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 NPM1P49-201ENST00000448027 714 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 ATP5EP1-201ENST00000510257 156 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC016957.1-201ENST00000534895 309 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC131238.1-201ENST00000617135 328 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 SNORD39.4-201ENST00000620099 78 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC002064.3-201ENST00000623448 346 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC073055.1-201ENST00000456901 1621 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AL606923.1-201ENST00000406616 190 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC112653.1-201ENST00000443851 386 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
MACF1Q9UPN3 SNORD62.1-201ENST00000362541 86 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 RNY3P14-201ENST00000384309 102 ntBASIC1.07□□□□□ -2.24
MACF1Q9UPN3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms