Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RPL12P26-201ENST00000452430 487 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 RPS24P6-201ENST00000452670 400 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC092754.2-201ENST00000463506 460 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC008427.1-201ENST00000503102 655 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 SUMO2P5-201ENST00000506790 245 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 SULT1C2P1-202ENST00000562418 459 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC090079.2-201ENST00000575289 768 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 ZNF415P1-201ENST00000582279 1166 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC128687.1-201ENST00000605304 619 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC006023.2-201ENST00000609916 167 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC007275.1-201ENST00000621243 671 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AP000720.1-201ENST00000625091 483 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 MIR3651-201ENST00000630427 90 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC026634.1-201ENST00000634369 198 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 AC092326.2-201ENST00000624772 1561 ntBASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
NPIPA1Q9UND3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AL049781.1-201ENST00000623195 3585 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC004925.1-201ENST00000624256 2706 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 SNORA51.6-201ENST00000384151 125 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 SNORD17-201ENST00000390930 237 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RNU6-1300P-201ENST00000391046 108 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC016769.3-201ENST00000396562 315 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AL136116.1-201ENST00000403591 381 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AP000567.1-201ENST00000406413 156 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RNA5SP129-201ENST00000410276 118 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RNU2-28P-201ENST00000410457 189 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RNA5SP120-201ENST00000410900 112 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 BX323014.1-201ENST00000412876 237 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 MTCO3P12-201ENST00000416718 547 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AIMP1P1-201ENST00000418670 937 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 PTP4A1P7-201ENST00000423476 514 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC002075.2-201ENST00000425207 252 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 C1DP1-201ENST00000426049 402 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RAC1P8-201ENST00000427086 527 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC005019.1-201ENST00000436455 431 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 HMGB1P12-201ENST00000438594 598 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 CYCSP32-201ENST00000440548 321 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 MTCO1P48-201ENST00000448024 1096 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 HMGN2P16-201ENST00000456802 261 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RPL23AP14-201ENST00000468281 468 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC023598.1-201ENST00000472521 361 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 VPS26AP1-201ENST00000483197 979 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RN7SKP57-201ENST00000517248 293 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AL139174.1-201ENST00000531489 886 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC008127.2-201ENST00000549925 1075 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC126177.3-201ENST00000551839 688 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC087481.2-201ENST00000565492 330 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC012182.1-201ENST00000570133 895 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 MIR4738-201ENST00000579134 87 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 MIR5708-201ENST00000579723 85 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 BNIP3P38-201ENST00000601117 544 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AL592148.2-201ENST00000612210 372 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 AC008083.4-201ENST00000615076 444 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 PLCE1P1-201ENST00000622094 305 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 ZNF663P-202ENST00000641770 1131 ntBASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
NPIPA1Q9UND3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 FRG1CP-201ENST00000358464 769 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 RNU6-236P-201ENST00000363886 106 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 SNORA38.1-201ENST00000364172 131 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL024474.1-201ENST00000404655 591 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms