Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ZNRF3Q9ULT6 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MUC2-202ENST00000613187 4845 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 SNORD56.2-201ENST00000363242 71 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 RNU6-97P-201ENST00000363387 104 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 Y_RNA.159-201ENST00000363674 87 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 SNORD82-201ENST00000365530 70 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MTATP6P18-201ENST00000417994 673 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 SNRPEP10-201ENST00000420249 274 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AL513185.2-201ENST00000425543 193 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC114495.1-201ENST00000441274 436 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 RPL36AP51-201ENST00000487216 318 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC110792.2-201ENST00000510278 224 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MIR4429-201ENST00000580105 73 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC245389.1-201ENST00000605141 529 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AL591034.3-201ENST00000605511 685 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AP003117.2-201ENST00000606010 545 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC008966.2-201ENST00000606157 453 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC012150.2-201ENST00000621300 544 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC091953.2-201ENST00000623979 160 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AP003400.5-201ENST00000624827 617 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 AC010300.1-201ENST00000600671 5134 ntBASIC5.57□□□□□ -1.52
ZNRF3Q9ULT6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 Y_RNA.234-201ENST00000364409 97 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 MT-TD-201ENST00000387419 68 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 COX5BP7-201ENST00000414780 274 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC016831.2-201ENST00000417179 352 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AL353193.1-201ENST00000421444 268 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 PSMA6P3-201ENST00000428242 164 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AL049734.2-201ENST00000441066 616 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 SNRPGP6-201ENST00000451124 220 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC010683.1-201ENST00000473673 378 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 RPS29P25-201ENST00000481709 171 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 PARP4P3-201ENST00000510265 317 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 OR8R1P-201ENST00000543943 764 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC092470.1-201ENST00000546187 132 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 MIR3118-1-201ENST00000581787 76 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 AC006130.2-201ENST00000586202 326 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 C8orf59P2-201ENST00000603441 271 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 NUP58P1-201ENST00000502546 1738 ntBASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.56□□□□□ -1.52
ZNRF3Q9ULT6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 AC133552.1-201ENST00000569988 4007 ntBASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
ZNRF3Q9ULT6 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms