Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 SNORD116-2-201ENST00000384274 95 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 SNORD116-6-201ENST00000384711 96 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 MTHFD2P2-201ENST00000407725 247 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 RNU4-72P-201ENST00000410754 173 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AL160275.2-201ENST00000412010 394 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 JKAMPP1-201ENST00000413804 919 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC098592.1-201ENST00000419352 333 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC091390.3-201ENST00000426478 338 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 UBE2V1P1-201ENST00000430836 445 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC005345.1-201ENST00000431868 217 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ATP5HP2-201ENST00000433885 485 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 MTND2P19-201ENST00000449129 1012 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 RPL12P26-201ENST00000452430 487 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 RPL21P10-201ENST00000463521 490 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 RPL21P103-201ENST00000479921 488 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 SLC2A13P1-201ENST00000531560 322 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 NCAPGP2-201ENST00000557911 754 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC037471.2-201ENST00000564941 598 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC106791.2-201ENST00000604680 391 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC091946.2-201ENST00000606105 291 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AL359535.1-201ENST00000612100 1087 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC233309.1-201ENST00000619522 751 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC004943.3-201ENST00000624116 600 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 MIR3974-201ENST00000637126 96 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 AC012321.1-201ENST00000561622 1588 ntBASIC4.22□□□□□ -1.73
DDX4Q9NQI0 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.21□□□□□ -1.73
DDX4Q9NQI0 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.21□□□□□ -1.73
DDX4Q9NQI0 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 FRG1CP-201ENST00000358464 769 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RNA5SP391-201ENST00000363456 119 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RNU6-525P-201ENST00000363685 104 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RNA5SP120-201ENST00000410900 112 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RN7SKP53-201ENST00000411337 315 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 BX323014.1-201ENST00000412876 237 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 TIMM9P2-201ENST00000419324 266 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 PTP4A1P5-201ENST00000420305 455 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC234781.2-201ENST00000426370 994 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 TXNL1P1-201ENST00000429528 554 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 YWHAZP8-201ENST00000436935 731 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 MTCYBP3-201ENST00000445588 1137 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 HMGB3P22-202ENST00000451823 572 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 HMGB3P30-201ENST00000457863 606 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RN7SL601P-201ENST00000471221 293 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RNU2-27P-201ENST00000516185 142 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 Vault.1-201ENST00000516474 102 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 Y_RNA.688-201ENST00000516565 95 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 IGHV3-32-201ENST00000519182 355 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 ISCA1P3-201ENST00000577104 373 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 MIR4999-201ENST00000585029 91 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC068790.5-201ENST00000602741 355 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AL109653.1-201ENST00000603091 248 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC112220.3-201ENST00000605502 502 ntBASIC4.21□□□□□ -1.74
DDX4Q9NQI0 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms