Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 GAPDHP39-201ENST00000481866 979 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC068724.1-201ENST00000487100 792 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC093663.1-201ENST00000497190 394 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 HMGN1P15-201ENST00000513870 295 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AP000619.3-201ENST00000535634 1127 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC019176.2-201ENST00000611579 315 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 uc_338.1-201ENST00000612113 180 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC091903.1-201ENST00000624322 454 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 AL049780.3-201ENST00000624612 1583 ntBASIC3□□□□□ -1.93
CCNB1IP1Q9NPC3 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RNU4-35P-201ENST00000362588 141 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 NFIB-202ENST00000380924 840 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AL023807.1-201ENST00000407932 359 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RNA5SP344-201ENST00000411081 104 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RPS6P14-201ENST00000425165 719 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC093151.1-201ENST00000427711 313 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC091286.1-201ENST00000431233 461 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ATP5JP1-201ENST00000431631 322 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 HMGN2P31-201ENST00000432430 273 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RPL23AP16-201ENST00000441715 421 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 MTND2P19-201ENST00000449129 1012 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 PDSS1P2-201ENST00000449397 678 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 SETP6-201ENST00000479329 568 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RN7SKP43-201ENST00000516173 320 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 SNORA31.8-201ENST00000516327 108 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ZNF705CP-201ENST00000530515 889 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC018630.1-201ENST00000541376 925 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC126177.3-201ENST00000551839 688 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC092354.2-201ENST00000607786 514 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC009318.4-201ENST00000620496 486 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC097460.3-201ENST00000623099 442 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AC095031.1-201ENST00000623685 672 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AL392088.2-201ENST00000637607 285 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 ZNF849P-201ENST00000594711 1566 ntBASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
CCNB1IP1Q9NPC3 AL136520.1-201ENST00000600311 1322 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC092435.3-201ENST00000565538 3654 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 U3.29-201ENST00000391296 212 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 STAT4-203ENST00000409995 709 ntTSL 5 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 RPL23AP69-201ENST00000431134 458 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 ARL4AP4-201ENST00000434170 518 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AL445669.2-201ENST00000454425 421 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 MTCO3P2-201ENST00000457365 171 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 RPS20P24-201ENST00000457473 361 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 SNORA84-201ENST00000459229 133 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AL672167.3-201ENST00000465951 960 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC026412.2-201ENST00000512270 1075 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 RN7SKP157-201ENST00000516174 282 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC239860.2-201ENST00000525886 270 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC011611.5-201ENST00000552477 578 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 MTCO1P40-201ENST00000574371 625 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 COX6CP3-201ENST00000580869 223 ntBASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.98□□□□□ -1.93
CCNB1IP1Q9NPC3 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms