Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AC120057.2-201ENST00000571520 271 ntBASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AL139344.1-201ENST00000605228 195 ntBASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AL607023.1-201ENST00000620045 248 ntBASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
POLR1BQ9H9Y6 AC011477.1-204ENST00000623416 1325 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 RNU6-253P-201ENST00000384730 105 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 CYCSP45-201ENST00000402289 315 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 RPS15AP38-201ENST00000413110 372 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 EI24P1-201ENST00000416584 867 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL161631.1-201ENST00000417933 486 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL356535.1-201ENST00000440335 398 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 HMGN2P21-201ENST00000447764 270 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 RPL38P1-201ENST00000460914 211 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 RPS29P19-201ENST00000479709 171 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AF213884.1-201ENST00000488102 463 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 RNU6-150P-201ENST00000516237 95 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 TRMT10BP1-201ENST00000519377 943 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 CBX3P5-201ENST00000552017 521 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 MTND3P12-201ENST00000559068 328 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC141257.3-201ENST00000572906 215 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL353778.1-201ENST00000603149 408 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AP000811.1-201ENST00000603803 651 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC068313.1-201ENST00000604028 1008 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 SNORA51-201ENST00000606420 132 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL713922.2-201ENST00000619384 716 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AL445264.1-201ENST00000621719 171 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 AC087359.1-201ENST00000508335 1740 ntBASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.98□□□□□ -1.77
POLR1BQ9H9Y6 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 Y_RNA.18-201ENST00000362461 102 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 RNY3P9-201ENST00000384727 106 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 MIR3074-201ENST00000384885 81 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 SNORD66.1-201ENST00000391230 76 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 RPL7P30-201ENST00000420888 709 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AL590233.1-201ENST00000430017 456 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AL591503.2-201ENST00000442314 1005 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 MEMO1P3-201ENST00000459811 302 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AP001992.1-205ENST00000462248 379 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 RPL31P50-201ENST00000471002 296 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 AC006064.5-201ENST00000541782 248 ntBASIC3.97□□□□□ -1.77
POLR1BQ9H9Y6 OR7K1P-201ENST00000546439 926 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms