Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AP001429.1-201ENST00000602568 530 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC106900.2-201ENST00000604994 317 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC008966.2-201ENST00000606157 453 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 RMST_3.1-201ENST00000611651 109 ntBASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CNTNAP4Q9C0A0 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RNA5SP171-201ENST00000391071 115 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RPL23AP32-201ENST00000395315 459 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RPS4XP8-201ENST00000402039 771 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RNU2-6P-201ENST00000411404 190 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC079809.1-201ENST00000415468 276 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 MTATP6P18-201ENST00000417994 673 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ELOCP4-201ENST00000420090 333 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AL353729.1-201ENST00000425044 720 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 MTCO3P46-201ENST00000425787 232 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC004938.1-201ENST00000438468 308 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RPL23AP52-201ENST00000439311 478 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RPS27AP13-201ENST00000498403 237 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 IGKV2-36-201ENST00000519999 223 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 HPRT1P3-201ENST00000539521 576 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 PDCD5P1-201ENST00000543528 309 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC093027.1-201ENST00000546698 429 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC093012.1-202ENST00000549403 582 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 SUB1P2-201ENST00000556401 297 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 HSPE1P3-201ENST00000559254 309 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC243960.4-201ENST00000600532 288 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC079587.1-201ENST00000603846 277 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC113139.1-201ENST00000605049 239 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AC006133.1-201ENST00000617106 264 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 ATP8A2P2-201ENST00000437678 1568 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 DHX9P1-201ENST00000436565 3076 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 AL158163.1-201ENST00000603915 1649 ntBASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CNTNAP4Q9C0A0 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 RNU6-1120P-201ENST00000362988 108 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 MIR3065-201ENST00000390137 79 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 RNU6-510P-201ENST00000391239 108 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AL136131.1-201ENST00000406079 803 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 EIF4HP2-201ENST00000424380 563 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 RPL35AP12-201ENST00000425362 338 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AL121877.1-201ENST00000453704 622 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 RNU6-835P-201ENST00000516974 104 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 AF279873.1-201ENST00000523393 313 ntBASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.68□□□□□ -1.5
CNTNAP4Q9C0A0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms