Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.82□□□□□ -1.48
CNTNAP3Q9BZ76 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.82□□□□□ -1.48
CNTNAP3Q9BZ76 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
CNTNAP3Q9BZ76 Z97989.1-201ENST00000531702 2421 ntBASIC5.82□□□□□ -1.48
CNTNAP3Q9BZ76 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 Z95327.2-201ENST00000414579 1873 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RPL23P2-201ENST00000320371 421 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RNA5SP258-201ENST00000362750 119 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 Y_RNA.234-201ENST00000364409 97 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RNU6-1317P-201ENST00000364582 104 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AL109941.1-201ENST00000401925 229 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 SNRPEP6-201ENST00000407465 277 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RNU6-1156P-201ENST00000410365 100 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RNU4-46P-201ENST00000410818 138 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AL713922.1-201ENST00000416477 747 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RPL35AP31-201ENST00000418340 337 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RN7SL72P-201ENST00000460697 269 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 DYNLL1P5-201ENST00000467158 270 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC091021.1-201ENST00000468051 388 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RN7SL222P-201ENST00000476452 299 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RPL17P19-201ENST00000489069 552 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AP002812.1-201ENST00000495378 474 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 FTH1P21-201ENST00000512179 511 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 SNORA72.7-201ENST00000516349 94 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RNU6-1332P-201ENST00000516666 104 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 MRPS36P4-201ENST00000534436 298 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC004584.2-201ENST00000570407 410 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC024619.4-201ENST00000580924 316 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 MIR3941-201ENST00000582572 103 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AL445647.2-201ENST00000615170 130 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 ZNF402P-201ENST00000404435 3100 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC020658.2-201ENST00000559030 4020 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 AC034229.2-201ENST00000566945 2508 ntBASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CNTNAP3Q9BZ76 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 RNY3P11-201ENST00000364153 102 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 RNU6-153P-201ENST00000364422 104 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 Y_RNA.304-201ENST00000365011 112 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 RNU6-1127P-201ENST00000384580 107 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 MIR215-201ENST00000384858 110 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 HMGA1P8-201ENST00000414130 321 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC096920.1-201ENST00000423991 241 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC093655.2-201ENST00000425735 631 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC092651.1-201ENST00000426110 312 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 RPL23AP22-201ENST00000437556 453 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC108059.3-201ENST00000456388 214 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 RPS27P26-201ENST00000494583 239 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC026801.1-201ENST00000497178 464 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 CBX3P8-201ENST00000532412 525 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC024405.2-202ENST00000532731 184 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC004024.1-201ENST00000549244 247 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC092375.1-201ENST00000550410 637 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 MIR4643-201ENST00000577473 78 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 VN1R91P-201ENST00000594377 169 ntBASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.8□□□□□ -1.48
CNTNAP3Q9BZ76 AC245517.5-201ENST00000611529 162 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms