Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AC068587.2-201ENST00000478386 781 ntBASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AC018630.1-201ENST00000541376 925 ntBASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AL353997.5-201ENST00000618886 171 ntBASIC3.62□□□□□ -1.83
SCAPERQ9BY12 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
SCAPERQ9BY12 U8.9-201ENST00000365667 134 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 NEK4P1-201ENST00000433383 879 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 YWHAZP7-201ENST00000436906 631 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AC103975.1-201ENST00000482506 483 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AC110994.2-201ENST00000635481 492 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 FRG1DP-201ENST00000635586 771 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 RN7SKP140-201ENST00000411196 284 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 RPS20P25-201ENST00000412447 352 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 TRIAP1P1-201ENST00000427062 225 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AC008126.1-201ENST00000549019 480 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.61□□□□□ -1.83
SCAPERQ9BY12 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.61□□□□□ -1.83
SCAPERQ9BY12 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 AL355578.1-201ENST00000607405 1328 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 RNU1-91P-201ENST00000364746 163 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 RN7SKP282-201ENST00000516824 299 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 AC123904.3-201ENST00000547218 814 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 MAGOH2P-202ENST00000584384 429 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 AC104237.2-201ENST00000612456 443 ntBASIC3.6□□□□□ -1.83
SCAPERQ9BY12 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SCAPERQ9BY12 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCAPERQ9BY12 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCAPERQ9BY12 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SCAPERQ9BY12 AC091152.2-201ENST00000591628 2569 ntBASIC3.59□□□□□ -1.83
SCAPERQ9BY12 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 RPL21P2-201ENST00000440049 481 ntBASIC3.59□□□□□ -1.84
SCAPERQ9BY12 RPL7P52-201ENST00000449200 742 ntBASIC3.59□□□□□ -1.84
SCAPERQ9BY12 RPL9P33-201ENST00000484311 566 ntBASIC3.59□□□□□ -1.84
SCAPERQ9BY12 AL024509.2-201ENST00000493462 493 ntBASIC3.59□□□□□ -1.84
SCAPERQ9BY12 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 C2orf27A-204ENST00000623058 969 ntBASIC3.59□□□□□ -1.84
SCAPERQ9BY12 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SCAPERQ9BY12 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 OR4G2P-202ENST00000641004 1759 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 Z98742.2-201ENST00000431564 187 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 HMGB1P15-201ENST00000453854 435 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 SNRPGP18-201ENST00000553000 214 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 MIR5092-201ENST00000583139 88 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 AC009318.2-201ENST00000610917 651 ntBASIC3.58□□□□□ -1.84
SCAPERQ9BY12 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.58□□□□□ -1.84
SCAPERQ9BY12 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
SCAPERQ9BY12 SNORA64-201ENST00000384674 134 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 GSTA9P-201ENST00000406231 611 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 SAR1AP4-201ENST00000429225 591 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 AC116337.1-201ENST00000509680 687 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 ACTR6P1-201ENST00000514311 1104 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 RN7SKP219-201ENST00000516825 296 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.57□□□□□ -1.84
SCAPERQ9BY12 MIR6873-201ENST00000622788 63 ntBASIC3.57□□□□□ -1.84
SCAPERQ9BY12 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.57□□□□□ -1.84
SCAPERQ9BY12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AL445437.1-201ENST00000623157 3087 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AL512646.1-201ENST00000269395 1077 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 Y_RNA.4-201ENST00000362333 112 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AC010881.1-201ENST00000433830 235 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 SETP8-201ENST00000435341 628 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 RPL39P40-201ENST00000445481 146 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AC135999.1-201ENST00000478962 479 ntBASIC3.56□□□□□ -1.84
SCAPERQ9BY12 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
SCAPERQ9BY12 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms