Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC084824.4-201ENST00000620106 731 ntBASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 AC126544.2-201ENST00000625174 749 ntBASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 AC139713.2-210ENST00000641741 992 ntBASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 AC010733.2-201ENST00000589496 5702 ntBASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 MTND5P19-201ENST00000424872 1794 ntBASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.82□□□□□ -1.96
RSPO3Q9BXY4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 SNORD56.4-201ENST00000363883 71 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 SNORA48.2-201ENST00000390926 124 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 MTCO3P4-201ENST00000419236 787 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RPF2P1-201ENST00000424137 906 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC005189.1-201ENST00000431286 310 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AL591503.2-201ENST00000442314 1005 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 TPMTP4-201ENST00000450749 678 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC091179.1-201ENST00000461606 579 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 PRDX3P4-201ENST00000470828 747 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 PRELID3BP6-201ENST00000503839 571 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 MTND4LP22-201ENST00000508209 276 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 TPT1P8-201ENST00000510120 555 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC108120.2-201ENST00000512973 294 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RNU1-103P-201ENST00000516502 125 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RN7SKP244-201ENST00000516513 307 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RNA5SP380-201ENST00000517190 98 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AL121594.4-201ENST00000556211 1196 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RPAP2P1-201ENST00000603626 1168 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC113194.1-201ENST00000606037 500 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC027449.1-201ENST00000608890 407 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC245100.7-201ENST00000609678 442 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AC008759.3-201ENST00000613300 508 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 RMST_10.1-201ENST00000616309 154 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 AL512427.1-201ENST00000618593 349 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 ZNF833P-201ENST00000424938 1494 ntBASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
RSPO3Q9BXY4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC116096.1-201ENST00000566804 2314 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 MTND5P27-201ENST00000428871 1720 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 OR1S2-201ENST00000302592 978 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 SNORA51.2-201ENST00000364595 132 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 LINC01347-201ENST00000417964 355 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 RPL23AP69-201ENST00000431134 458 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 ARL5AP2-201ENST00000444698 533 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 DCLRE1CP1-201ENST00000454630 470 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 NCOR1P1-202ENST00000486162 291 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 GTF2IP9-201ENST00000502460 301 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 SUMO2P5-201ENST00000506790 245 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC010460.2-201ENST00000509054 677 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 RNU6-1004P-201ENST00000516584 111 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 CASP1-216ENST00000534497 825 ntTSL 5 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC106782.4-201ENST00000568264 210 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC124283.4-201ENST00000581815 456 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC034229.4-201ENST00000607861 441 ntBASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.8□□□□□ -1.96
RSPO3Q9BXY4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RSPO3Q9BXY4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.79□□□□□ -1.96
RSPO3Q9BXY4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
RSPO3Q9BXY4 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms