Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK1Q99986 AC245517.5-201ENST00000611529 162 ntBASIC4.38□□□□□ -1.71
VRK1Q99986 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.38□□□□□ -1.71
VRK1Q99986 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
VRK1Q99986 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK1Q99986 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
VRK1Q99986 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
VRK1Q99986 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.38□□□□□ -1.71
VRK1Q99986 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.38□□□□□ -1.71
VRK1Q99986 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
VRK1Q99986 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
VRK1Q99986 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
VRK1Q99986 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC007390.2-201ENST00000606229 3803 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK1Q99986 NXPH1-205ENST00000602349 1953 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 Y_RNA.159-201ENST00000363674 87 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 RN7SKP113-201ENST00000363891 295 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 RNU6-108P-201ENST00000365558 107 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 SNORA51.8-201ENST00000384234 132 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 SNORA66-201ENST00000384792 133 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 MIR589-201ENST00000385238 99 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 RNU6-837P-201ENST00000391056 108 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 CYB5AP4-201ENST00000396692 399 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VRK1Q99986 RPS15AP12-201ENST00000419498 388 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 ELOCP4-201ENST00000420090 333 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC009238.2-201ENST00000431026 355 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK1Q99986 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK1Q99986 RPL21P89-201ENST00000444021 467 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 Z80107.2-201ENST00000445127 392 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 WASF1P1-201ENST00000447560 1131 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 TPT1P14-201ENST00000448018 505 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC091685.2-201ENST00000454924 864 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 RNU7-59P-201ENST00000459101 61 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 RN7SL443P-201ENST00000464331 290 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC093824.1-201ENST00000508796 343 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 Y_RNA.693-201ENST00000516641 110 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK1Q99986 OR5D15P-201ENST00000531671 942 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.37□□□□□ -1.71
VRK1Q99986 OR4T1P-201ENST00000554933 911 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 SUB1P2-201ENST00000556401 297 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC008814.1-201ENST00000603797 406 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AL031176.1-201ENST00000604554 466 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC011626.1-201ENST00000604710 562 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC008966.2-201ENST00000606157 453 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AP001330.5-201ENST00000607176 411 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC007038.2-201ENST00000608095 740 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AL355073.2-201ENST00000612106 557 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC009161.2-201ENST00000624626 138 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 BMS1P21-201ENST00000634565 365 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 AC244258.1-201ENST00000637553 1071 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 MIR1321-201ENST00000637766 79 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
VRK1Q99986 AC244517.1-201ENST00000606030 2086 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 AC138915.3-201ENST00000562908 1389 ntBASIC4.37□□□□□ -1.71
VRK1Q99986 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
VRK1Q99986 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
VRK1Q99986 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
VRK1Q99986 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.36□□□□□ -1.71
VRK1Q99986 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VRK1Q99986 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.36□□□□□ -1.71
VRK1Q99986 RNU6-1097P-201ENST00000363586 107 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 RNU6-263P-201ENST00000363811 107 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 RNU1-39P-201ENST00000383897 165 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 Y_RNA.573-201ENST00000384763 105 ntBASIC4.36□□□□□ -1.71
VRK1Q99986 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 142.3 ms