Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC005726.1-201ENST00000494679 427 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 KCTD9P5-201ENST00000504141 1170 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 MTCYBP37-201ENST00000510642 1133 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 MTND4LP31-201ENST00000514859 294 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 SNORA64.4-201ENST00000516632 81 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 RN7SKP282-201ENST00000516824 299 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC00477Q96M19 MEG8-215ENST00000555354 469 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC2.55□□□□□ -2
LINC00477Q96M19 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.55□□□□□ -2
LINC00477Q96M19 MIR4666A-201ENST00000580160 79 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC090312.2-201ENST00000582687 378 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 MIR4760-201ENST00000585040 80 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AP001029.3-201ENST00000588063 596 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC103881.1-201ENST00000603476 538 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 SGO1P1-201ENST00000603525 1447 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC112220.2-201ENST00000605513 533 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC026790.2-201ENST00000606282 430 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC107081.3-201ENST00000612715 2034 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 VN1R74P-201ENST00000613259 503 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AL110115.1-201ENST00000614396 364 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC00477Q96M19 AC123767.1-202ENST00000620407 817 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 AC068724.3-201ENST00000625906 87 ntBASIC2.55□□□□□ -2
LINC00477Q96M19 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.55□□□□□ -2
LINC00477Q96M19 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LINC00477Q96M19 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.55□□□□□ -2
LINC00477Q96M19 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC00477Q96M19 U3.11-201ENST00000364476 212 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 RNU6-657P-201ENST00000383904 107 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC00477Q96M19 SNORA40.2-201ENST00000390847 128 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 DSTNP4-201ENST00000399472 474 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 MTCO1P56-201ENST00000401674 224 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 Z99755.1-201ENST00000414048 380 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 FCF1P2-201ENST00000415284 583 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC2.54□□□□□ -2
LINC00477Q96M19 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 CYCSP4-201ENST00000429682 331 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AL513175.1-201ENST00000431492 780 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.54□□□□□ -2
LINC00477Q96M19 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 MTCYBP42-201ENST00000444653 1130 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC079776.3-201ENST00000450665 370 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC093392.2-201ENST00000450682 337 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC087879.1-201ENST00000474343 374 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC134050.1-201ENST00000495088 933 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 AC112198.1-201ENST00000505369 1220 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 OR10V3P-201ENST00000525712 725 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.54□□□□□ -2
LINC00477Q96M19 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC023813.2-201ENST00000564321 469 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC034268.2-201ENST00000571784 482 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC015917.1-201ENST00000579654 510 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.54□□□□□ -2
LINC00477Q96M19 SNORD39.3-201ENST00000584451 71 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 VN1R83P-201ENST00000595685 445 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AL009028.1-201ENST00000604895 802 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC099676.1-201ENST00000608886 657 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AL592148.2-201ENST00000612210 372 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.54□□□□□ -2
LINC00477Q96M19 AC006386.1-201ENST00000619436 415 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 SNORD39.4-201ENST00000620099 78 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AC091046.2-201ENST00000620775 665 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 AL356321.1-201ENST00000621360 228 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 MIR6810-201ENST00000622701 70 ntBASIC2.54□□□□□ -2
LINC00477Q96M19 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.54□□□□□ -2
LINC00477Q96M19 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.54□□□□□ -2
LINC00477Q96M19 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.54□□□□□ -2
LINC00477Q96M19 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 BCLAF1P1-201ENST00000505813 2752 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 PTER-201ENST00000298942 3448 ntTSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.53□□□□□ -2
LINC00477Q96M19 SNORD116.1-201ENST00000365628 92 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 116.6 ms