Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 RNU6-4P-201ENST00000384205 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-5P-201ENST00000384238 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-3P-201ENST00000384314 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-2-201ENST00000384627 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 SNORA41-201ENST00000384675 132 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-9-201ENST00000384776 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-33P-201ENST00000384793 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RPL21P3-201ENST00000395517 478 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 SPA17P1-201ENST00000416656 452 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 UBE2V1P5-201ENST00000440070 405 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AP001086.1-201ENST00000494882 321 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AL355836.1-201ENST00000555951 870 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC105137.2-201ENST00000569073 466 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-6P-201ENST00000606623 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 MTND5P19-201ENST00000424872 1794 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
SPG11Q96JI7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 AL024474.1-201ENST00000404655 591 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 FAT1P1-201ENST00000406588 507 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC106872.3-201ENST00000495104 446 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 HSPE1P18-201ENST00000517602 280 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
SPG11Q96JI7 RNU6-316P-201ENST00000391027 107 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 RPL31P1-201ENST00000398116 372 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 RPS3AP9-201ENST00000417027 792 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 MTATP6P11-201ENST00000428071 670 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC010881.1-201ENST00000433830 235 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC009238.1-201ENST00000442165 424 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC009237.6-201ENST00000446969 424 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 ST13P20-201ENST00000447996 1065 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 RNU6-295P-201ENST00000516901 104 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 MIR6504-201ENST00000613520 61 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 AC091046.2-201ENST00000620775 665 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 OR1S1-201ENST00000624470 978 ntBASIC2.05□□□□□ -2.08
SPG11Q96JI7 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.05□□□□□ -2.08
SPG11Q96JI7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
SPG11Q96JI7 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 RNU4-44P-201ENST00000363050 141 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 RNU6-342P-201ENST00000384521 104 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.04□□□□□ -2.08
SPG11Q96JI7 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 AC010620.2-201ENST00000600135 313 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 AC096720.1-201ENST00000604441 183 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 MIR6515-201ENST00000619843 57 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.04□□□□□ -2.08
SPG11Q96JI7 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 AC097714.1-201ENST00000511272 1647 ntBASIC2.04□□□□□ -2.08
SPG11Q96JI7 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC2.04□□□□□ -2.08
SPG11Q96JI7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
SPG11Q96JI7 RN7SKP44-201ENST00000363602 316 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 RN7SKP60-201ENST00000516985 239 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 PDCL2P2-201ENST00000533651 189 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC008121.2-201ENST00000614647 523 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
SPG11Q96JI7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 MIR583-201ENST00000384846 75 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 CACYBPP1-201ENST00000438592 684 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 RPS4XP11-201ENST00000446897 772 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC021269.2-201ENST00000532318 330 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 AL391813.2-201ENST00000609113 322 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 CRYM-AS1-204ENST00000637983 556 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
SPG11Q96JI7 AC093536.2-201ENST00000565257 1406 ntBASIC2.03□□□□□ -2.08
SPG11Q96JI7 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
SPG11Q96JI7 AC233981.2-201ENST00000611524 1614 ntBASIC2.03□□□□□ -2.09
SPG11Q96JI7 Y_RNA.30-201ENST00000362572 97 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 RNU6-805P-201ENST00000365643 106 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 AL583834.1-201ENST00000406943 343 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 AL023807.1-201ENST00000407932 359 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 RNA5SP38-201ENST00000410750 119 ntBASIC2.02□□□□□ -2.09
SPG11Q96JI7 AL451074.5-201ENST00000415894 435 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms