Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 MTCO1P42-201ENST00000457379 726 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 SNORD108-201ENST00000459332 71 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 IGLV2-34-201ENST00000490007 283 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC107401.1-201ENST00000503426 685 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC093767.1-201ENST00000504523 156 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC024589.1-201ENST00000512207 263 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC022861.1-201ENST00000522981 663 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 OR5M7P-201ENST00000526140 972 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 OR5AP1P-201ENST00000529730 940 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 TOMM20P2-201ENST00000540082 421 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC135001.1-201ENST00000544546 283 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC009063.1-201ENST00000563342 702 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 MIR4277-201ENST00000578298 84 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 RPL12P25-202ENST00000598100 674 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 BBIP1P1-201ENST00000602999 279 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AL138721.1-201ENST00000616756 179 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC009318.4-201ENST00000620496 486 ntBASIC4.33□□□□□ -1.72
VPS50Q96JG6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS50Q96JG6 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS50Q96JG6 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS50Q96JG6 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 XIAPP3-201ENST00000312918 795 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 RNU6-533P-201ENST00000384144 107 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 ENSAP1-201ENST00000392855 326 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 OR6C69P-201ENST00000394268 893 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 BTBD10P2-201ENST00000404779 676 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 RNU6-248P-201ENST00000410720 107 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 ELOCP19-201ENST00000411919 318 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AMD1P2-201ENST00000412936 992 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 RPL36AP36-201ENST00000418616 301 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC008065.1-201ENST00000428525 348 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 RPL23AP25-201ENST00000430973 463 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC109583.1-201ENST00000432156 268 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 Z74696.2-201ENST00000436514 498 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 RPL23AP74-201ENST00000437246 471 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 NANOGNBP1-201ENST00000448444 480 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AP000542.1-201ENST00000448473 371 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 PAXBP1P1-201ENST00000449315 447 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 USP9YP12-201ENST00000450481 570 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL590365.1-201ENST00000450788 243 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 SNORD42A-201ENST00000459584 64 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 RPL37P6-202ENST00000464216 403 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 RPL9P33-201ENST00000484311 566 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC022447.3-201ENST00000506865 495 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC007016.1-201ENST00000512110 244 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AP000827.1-201ENST00000527814 258 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC016957.1-201ENST00000534895 309 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 PARP1P2-201ENST00000556806 195 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC084783.1-201ENST00000565846 910 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 CYP4A43P-201ENST00000568156 121 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 LLPHP1-201ENST00000603571 367 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC025588.3-201ENST00000604182 274 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL159169.3-201ENST00000608871 561 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL445264.1-201ENST00000621719 171 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC091905.2-201ENST00000623143 306 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
VPS50Q96JG6 AC018555.1-201ENST00000567548 1980 ntBASIC4.32□□□□□ -1.72
VPS50Q96JG6 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS50Q96JG6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms