Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 TRAV8-5-201ENST00000537369 341 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 MIR4307-201ENST00000582802 84 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 FAM27D1-201ENST00000612308 341 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AL445264.1-201ENST00000621719 171 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC004009.2-201ENST00000623016 728 ntBASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDK5RAP3Q96JB5 AC006378.2-201ENST00000623178 2476 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 OR11H4-201ENST00000315409 1082 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 RNU1-32P-201ENST00000363937 159 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 RNU2-16P-201ENST00000410712 136 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 RAC1P3-201ENST00000416129 580 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MTCO1P21-201ENST00000416634 589 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MTATP6P27-201ENST00000416987 621 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC012065.2-201ENST00000421295 375 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 COX6CP17-201ENST00000421389 185 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 USP9YP14-201ENST00000430663 563 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 USP9YP7-201ENST00000436723 430 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC127537.2-201ENST00000439258 465 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 GDI2P2-201ENST00000445131 608 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 USP9YP32-201ENST00000452432 430 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 HMGB1P36-201ENST00000487709 576 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC008958.1-201ENST00000511047 682 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 FABP5P5-201ENST00000515537 406 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MTND4LP18-201ENST00000526864 291 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AP002748.2-201ENST00000528671 348 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MIR4284-201ENST00000578924 81 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC087683.1-201ENST00000591187 441 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 AC022916.3-201ENST00000592961 742 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 VN1R79P-201ENST00000593540 513 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 IPO5P1-202ENST00000600039 287 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MIR7702-201ENST00000621931 59 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 MIR7641-1-201ENST00000627518 61 ntBASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDK5RAP3Q96JB5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-878P-201ENST00000384578 110 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 RNU6-192P-201ENST00000391253 100 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 SNORA11B-201ENST00000408175 129 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 OFD1P18Y-201ENST00000420889 959 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 PSMA6P3-201ENST00000428242 164 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 HLA-N-201ENST00000437516 135 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 RPL23AP89-201ENST00000439324 255 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 SNRPGP5-201ENST00000456003 220 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 FTH1P9-201ENST00000513251 355 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AP002453.2-201ENST00000533503 320 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AC024224.1-201ENST00000538284 609 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 MTND1P15-201ENST00000579262 949 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AL390208.1-201ENST00000605885 644 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AL031666.3-201ENST00000609320 1006 ntBASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.74□□□□□ -1.65
CDK5RAP3Q96JB5 uc_338.32-201ENST00000615087 172 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms