Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 RNU1-61P-201ENST00000516107 151 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 SNORA64.4-201ENST00000516632 81 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC124293.1-201ENST00000530034 493 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC012182.1-201ENST00000570133 895 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AC245100.7-201ENST00000609678 442 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AL591516.1-201ENST00000611326 274 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 AL162574.2-201ENST00000614618 657 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 HPVC1-201ENST00000629899 1198 ntBASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
ECHDC3Q96DC8 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC004925.1-201ENST00000624256 2706 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC073325.2-201ENST00000339545 159 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 SNORD56.3-201ENST00000363507 71 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 U3.11-201ENST00000364476 212 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RNU6-444P-201ENST00000383988 108 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RNU6-441P-201ENST00000384545 106 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 MT-TC-201ENST00000387405 66 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RNU1-101P-201ENST00000391171 127 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL583834.1-201ENST00000406943 343 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL606495.1-201ENST00000422100 813 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC114973.1-201ENST00000429057 632 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RPS7P2-201ENST00000435134 607 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RPL17P49-201ENST00000443728 411 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 RNA5SP380-201ENST00000517190 98 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC092470.1-201ENST00000546187 132 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AL390240.1-201ENST00000612950 384 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC097460.3-201ENST00000623099 442 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 AC132825.7-201ENST00000638744 335 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 MAPK10-362ENST00000641864 4484 ntBASIC3.1□□□□□ -1.91
ECHDC3Q96DC8 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 RNA5SP383-201ENST00000362934 120 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 RNU6-374P-201ENST00000364146 108 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 RNU6-837P-201ENST00000391056 108 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC110754.1-201ENST00000399740 601 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC008173.1-201ENST00000418901 264 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC093392.2-201ENST00000450682 337 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 NPM1P13-201ENST00000452663 865 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 GTF2IP12-201ENST00000456547 356 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 snoU13.24-201ENST00000458998 104 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC089999.1-201ENST00000460336 374 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 RPL21P8-201ENST00000465083 535 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 S100A11P2-201ENST00000467589 312 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 HMGN2P13-201ENST00000476476 274 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 MTND3P24-201ENST00000506306 329 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 OR8K4P-201ENST00000534608 872 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 MTCO3P24-201ENST00000572729 782 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC133794.1-201ENST00000602731 914 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC004832.5-201ENST00000608677 401 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC006963.1-201ENST00000624003 1052 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AP001002.2-201ENST00000625137 386 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AC068620.4-201ENST00000636730 1182 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 AL355578.1-201ENST00000607405 1328 ntBASIC3.09□□□□□ -1.91
ECHDC3Q96DC8 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms