Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC025048.6-202ENST00000627667 438 ntBASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHMP4CQ96CF2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 MIR372-201ENST00000362225 67 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP388-201ENST00000362584 119 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RNU5F-6P-201ENST00000362979 116 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RNU6-761P-201ENST00000384148 107 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 U8.14-201ENST00000390843 143 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP104-201ENST00000410989 118 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RPS12P23-201ENST00000419579 400 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 CYCSP46-201ENST00000423569 204 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 COX6B1P7-201ENST00000430845 235 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 TRIM60P18-201ENST00000441518 828 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 COX6CP12-201ENST00000446748 202 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RN7SL691P-201ENST00000494487 301 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC010424.1-201ENST00000506336 297 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC116347.2-201ENST00000514912 523 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC093853.1-201ENST00000515689 483 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP154-201ENST00000516193 111 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 OR4R3P-201ENST00000525084 838 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC136624.4-201ENST00000573044 370 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC083760.1-201ENST00000589621 670 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC006329.2-201ENST00000611491 394 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 AC009951.1-201ENST00000623674 2614 ntBASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC5.02□□□□□ -1.61
CHMP4CQ96CF2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AL161781.1-201ENST00000354277 403 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RNA5SP52-201ENST00000362448 134 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RNY3P10-201ENST00000384764 102 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 MTCYBP36-201ENST00000404146 440 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 MTCO1P17-201ENST00000411522 491 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RPL17P12-201ENST00000413391 526 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AL157831.1-201ENST00000426134 473 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RPL37P21-201ENST00000435890 276 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AP000936.2-201ENST00000447151 681 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RPL7P52-201ENST00000449200 742 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AL121877.1-201ENST00000453704 622 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 OR6K1P-201ENST00000456766 971 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AP001992.1-205ENST00000462248 379 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AP001025.2-201ENST00000490908 477 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC023424.2-201ENST00000493479 777 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 RN7SKP21-201ENST00000516503 220 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC007224.1-201ENST00000564410 144 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC090615.1-201ENST00000577519 154 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 MIR544B-201ENST00000582372 78 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC064872.1-201ENST00000604823 1072 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC068276.1-201ENST00000605793 379 ntBASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CHMP4CQ96CF2 AC023043.4-201ENST00000612081 449 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms