Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 MIR4330-201ENST00000579077 105 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 MIR3138-201ENST00000585238 82 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 VN1R82P-201ENST00000601481 356 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 BDH2P1-201ENST00000602288 736 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL592436.1-201ENST00000605135 558 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC112220.3-201ENST00000605502 502 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AL110115.1-201ENST00000614396 364 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC008121.2-201ENST00000614647 523 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC095031.1-201ENST00000623685 672 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
VPS33AQ96AX1 AC011477.1-204ENST00000623416 1325 ntBASIC3.69□□□□□ -1.82
VPS33AQ96AX1 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SETP5-201ENST00000437270 562 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SNRPEP7-201ENST00000438350 220 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 MTCYBP34-201ENST00000439552 670 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AL359073.1-201ENST00000448036 403 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 BX322784.1-201ENST00000455793 1077 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 snoU13.8-201ENST00000458890 104 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RPL23AP14-201ENST00000468281 468 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 TXNP6-201ENST00000510190 310 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RNA5SP208-201ENST00000516156 78 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RNU6-150P-201ENST00000516237 95 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RN7SKP83-201ENST00000516512 178 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SUMO2P20-201ENST00000520803 283 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AP001372.4-201ENST00000524889 472 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 YPEL5P3-201ENST00000547227 352 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 BNIP3P5-201ENST00000562290 498 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AL353997.4-201ENST00000586196 166 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AL022099.1-201ENST00000604551 712 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC105148.1-201ENST00000604961 409 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 ARF4P1-201ENST00000605447 541 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC012443.1-201ENST00000605605 231 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AP000240.1-201ENST00000609910 452 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AL445567.2-201ENST00000618935 498 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC023510.2-201ENST00000622162 746 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AP002782.1-201ENST00000623107 614 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 AC073530.2-201ENST00000623987 261 ntBASIC3.68□□□□□ -1.82
VPS33AQ96AX1 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
VPS33AQ96AX1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 MIR135A2-201ENST00000384854 100 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 RPS4XP9-201ENST00000405151 780 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 ARF4P2-201ENST00000430209 526 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 ZYG11AP1-201ENST00000430329 837 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 FGF7P5-201ENST00000441829 291 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
VPS33AQ96AX1 CFTRP1-201ENST00000456646 183 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC004801.2-202ENST00000463559 283 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AC084198.1-201ENST00000477747 402 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 RNA5SP216-201ENST00000516111 123 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 RN7SKP209-201ENST00000516888 304 ntBASIC3.67□□□□□ -1.82
VPS33AQ96AX1 AP003730.1-201ENST00000524605 285 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms