Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RNU5B-4P-201ENST00000363508 111 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RNU6-1243P-201ENST00000364028 107 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RNA5SP72-201ENST00000364442 117 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RNU6-335P-201ENST00000364563 113 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AL035405.1-201ENST00000400795 710 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AL355615.1-201ENST00000406187 641 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RNA5SP274-201ENST00000410484 108 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC063979.1-201ENST00000415539 377 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 TOMM22P1-201ENST00000418578 312 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC005517.2-201ENST00000424673 553 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RPP40P1-201ENST00000426762 456 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 YME1L1P1-201ENST00000429435 297 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 TRIM60P18-201ENST00000441518 828 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 Z77249.1-201ENST00000444622 1175 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 ELOCP23-201ENST00000452014 332 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RPS27AP1-201ENST00000475545 471 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC006483.1-201ENST00000487308 313 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC124293.1-201ENST00000530034 493 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC068339.2-201ENST00000534395 618 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 RPL21P12-201ENST00000559810 515 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 MIR4504-201ENST00000577413 92 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 MIR3908-201ENST00000579798 126 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 ZNF415P1-201ENST00000582279 1166 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC017100.2-201ENST00000584628 355 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC006116.7-201ENST00000590141 756 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC099785.1-201ENST00000605697 437 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AP004247.3-201ENST00000608682 624 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC006023.2-201ENST00000609916 167 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC084757.4-201ENST00000616350 526 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC006249.1-201ENST00000621223 471 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AP000943.4-201ENST00000622912 357 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 AC117529.2-201ENST00000512159 2068 ntBASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RTN4IP1Q8WWV3 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 FAM35CP-201ENST00000554755 2470 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 SNORA51.12-201ENST00000384448 134 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 U3.19-201ENST00000390893 196 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPL31P1-201ENST00000398116 372 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RNU2-71P-201ENST00000411395 189 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 OR51A3P-201ENST00000413596 924 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPL21P66-201ENST00000426566 466 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPL7P52-201ENST00000449200 742 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 PRSS3P4-201ENST00000453323 162 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPS4XP10-201ENST00000465034 731 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPS17P11-201ENST00000474297 293 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPS26P21-201ENST00000475397 348 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPL32P34-201ENST00000486380 400 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC091860.1-201ENST00000505723 432 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RNU6-1073P-201ENST00000517182 106 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC104072.1-201ENST00000568817 668 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 MIR2682-201ENST00000580305 110 ntBASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.59□□□□□ -1.99
RTN4IP1Q8WWV3 AL133393.1-201ENST00000603277 287 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms