Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 SNORD6-201ENST00000365444 73 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 CYCSP45-201ENST00000402289 315 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 MTND4LP13-201ENST00000425022 298 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 UBE2D3P1-201ENST00000436669 444 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC008565.1-201ENST00000509046 885 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 TPMTP1-201ENST00000592307 737 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 DNAJC19P3-201ENST00000594491 331 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC084373.1-201ENST00000603311 235 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AL135786.2-201ENST00000608422 615 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC009487.2-201ENST00000420969 6821 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 RPL9P7-201ENST00000330965 580 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 MIR764-201ENST00000390811 85 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 RNA5SP210-201ENST00000391034 120 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AL590290.1-201ENST00000405336 380 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 MTCYBP7-201ENST00000419540 1134 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 CR848007.2-201ENST00000424918 787 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC093716.1-201ENST00000435923 377 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 MTND4P15-201ENST00000437913 1033 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC069277.2-201ENST00000454211 432 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 CEACAMP4-201ENST00000457676 421 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC092185.1-201ENST00000491371 97 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AP000857.1-201ENST00000532151 543 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC025260.1-201ENST00000548858 430 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AC044913.1-201ENST00000557200 430 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 MIR3605-201ENST00000583214 100 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 AL356094.1-201ENST00000624663 1212 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 XPOTP1-201ENST00000443317 2398 ntBASIC2.72□□□□□ -1.97
SHROOM3Q8TF72 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 Y_RNA.226-201ENST00000364337 114 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 OR51A3P-201ENST00000413596 924 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AL096701.2-201ENST00000416920 238 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AL645937.1-202ENST00000421799 937 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 MTCO1P39-201ENST00000426148 480 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AL513321.1-201ENST00000441175 761 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AP000936.2-201ENST00000447151 681 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 RPL23AP62-201ENST00000463396 453 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 CABYRP1-201ENST00000465493 1045 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC108860.1-201ENST00000484521 383 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC093663.2-201ENST00000484625 313 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC108210.2-201ENST00000503681 201 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC021146.7-201ENST00000509604 775 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 RPL7P20-201ENST00000520308 745 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AL133271.1-201ENST00000538229 291 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 HPRT1P3-201ENST00000539521 576 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 CKS1BP1-201ENST00000555221 240 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC107871.2-201ENST00000612894 502 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC020923.1-201ENST00000624021 917 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 AC022031.1-201ENST00000585985 2593 ntBASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.71□□□□□ -1.98
SHROOM3Q8TF72 RNU6-31P-201ENST00000384388 108 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 Z86062.1-201ENST00000406773 777 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL591806.2-201ENST00000433122 173 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 XKRY2-201ENST00000442362 1093 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL627224.1-201ENST00000448334 444 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 snoU13.23-201ENST00000458863 104 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC027338.1-201ENST00000514840 825 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 OR6R2P-201ENST00000609216 300 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.7□□□□□ -1.98
SHROOM3Q8TF72 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 351.8 ms