Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNED1Q8TER0 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SNED1Q8TER0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SNED1Q8TER0 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
SNED1Q8TER0 AL136116.1-201ENST00000403591 381 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC104454.1-201ENST00000421341 1401 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 IPMKP1-201ENST00000425988 855 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL390023.1-201ENST00000428836 262 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC005345.1-201ENST00000431868 217 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL031663.1-201ENST00000437445 219 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC005002.1-201ENST00000447458 540 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 USP9YP25-201ENST00000457708 443 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 MTCO2P15-201ENST00000532655 656 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC022080.3-201ENST00000544433 482 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 CYP2C60P-201ENST00000566088 139 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 MIR4738-201ENST00000579134 87 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 UBL5P2-201ENST00000583788 219 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL390838.2-201ENST00000602394 274 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 MIR7973-1-201ENST00000614683 76 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 LINC00901.1-201ENST00000617252 152 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL356321.1-201ENST00000621360 228 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC131159.1-201ENST00000621854 213 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 NACA3P-201ENST00000359690 648 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 Y_RNA.201-201ENST00000364052 96 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 RNU6-317P-201ENST00000384031 107 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 RNU6-185P-201ENST00000384421 107 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL603766.1-201ENST00000407763 664 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 USP9YP26-201ENST00000421008 661 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL513175.2-201ENST00000422071 443 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL138785.1-201ENST00000425821 331 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 RPL23AP82-202ENST00000427528 469 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 BX890604.2-201ENST00000427883 474 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL513175.1-201ENST00000431492 780 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 CBX1P4-201ENST00000439415 457 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC118469.1-201ENST00000442943 488 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL357552.1-201ENST00000445254 415 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC140076.1-201ENST00000449897 361 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC107401.1-201ENST00000503426 685 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC034244.1-201ENST00000507687 207 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AF213884.2-201ENST00000510417 903 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 MRPS33P3-201ENST00000513456 322 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 NDUFB9P3-201ENST00000521269 501 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SNED1Q8TER0 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC104229.1-201ENST00000561364 255 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 MIR3945-201ENST00000581853 98 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL583856.2-201ENST00000606298 543 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC245100.7-201ENST00000609678 442 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL360219.1-201ENST00000610230 366 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 VIS1.1-201ENST00000610517 203 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AL157817.1-201ENST00000614264 790 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC022306.2-201ENST00000617563 647 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC116563.2-201ENST00000624751 535 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC244205.2-202ENST00000635781 342 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
SNED1Q8TER0 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 ELL2P3-201ENST00000457883 1602 ntBASIC3.95□□□□□ -1.78
SNED1Q8TER0 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SNED1Q8TER0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.94□□□□□ -1.78
SNED1Q8TER0 SNORA5B-201ENST00000363786 132 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RNU4-24P-201ENST00000364565 139 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 SNORD116-12-201ENST00000384468 92 ntBASIC3.94□□□□□ -1.78
SNED1Q8TER0 RNU6-244P-201ENST00000391028 104 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms