Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AL670379.12-201ENST00000605291 253 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 AC018889.1-201ENST00000605372 397 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 AL670379.9-201ENST00000605428 253 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 MIR6798-201ENST00000612887 67 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 U2.1-201ENST00000618978 145 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 AC098657.3-201ENST00000620434 263 ntBASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHKBP1Q8TBC3 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SHKBP1Q8TBC3 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.46□□□□□ -1.53
SHKBP1Q8TBC3 USP9YP4-201ENST00000424401 1745 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC010266.2-201ENST00000564741 3255 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL512646.1-201ENST00000269395 1077 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-853P-201ENST00000364306 107 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-310P-201ENST00000384655 107 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.552-201ENST00000384665 112 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL078599.1-201ENST00000402075 293 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RNU2-6P-201ENST00000411404 190 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 GJA6P-201ENST00000415117 1042 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 SKA2P1-201ENST00000425592 390 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 HMGN2P27-201ENST00000427352 270 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL049745.1-201ENST00000433953 286 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RPS20P5-201ENST00000434808 360 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC026410.2-201ENST00000460281 156 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 ABCC13-202ENST00000463099 3842 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC104563.1-201ENST00000476147 376 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL049874.2-201ENST00000492636 288 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 RNA5SP230-201ENST00000517039 122 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC087854.1-201ENST00000519706 414 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AP000827.1-201ENST00000527814 258 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AP005435.4-201ENST00000529514 284 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AP000889.1-201ENST00000530968 660 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC007375.1-201ENST00000554513 578 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC113195.1-201ENST00000579952 141 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 BBIP1P1-201ENST00000602999 279 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 MIR6820-201ENST00000611508 62 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 EIF3FP1-201ENST00000613970 806 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 MIR7973-1-201ENST00000614683 76 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 AC067931.1-201ENST00000624190 671 ntBASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
SHKBP1Q8TBC3 MTND5P30-201ENST00000452896 1731 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC003973.3-201ENST00000624863 2822 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.167-201ENST00000363735 109 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.252-201ENST00000364556 101 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RNU6-99P-201ENST00000364721 107 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 Y_RNA.482-201ENST00000384377 111 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RNY1P14-201ENST00000384426 108 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL590290.1-201ENST00000405336 380 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL034379.1-201ENST00000423216 253 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RHOT1P3-201ENST00000436571 331 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AP1S2P1-201ENST00000457344 379 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RNU7-27P-201ENST00000459281 62 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RPL7L1P8-201ENST00000469911 741 ntBASIC5.45□□□□□ -1.54
SHKBP1Q8TBC3 RPL23AP71-201ENST00000470966 469 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms