Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 OR2BH1P-201ENST00000608850 864 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC008083.4-201ENST00000615076 444 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.96□□□□□ -1.94
CLHC1Q8NHS4 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 RNU6-543P-201ENST00000362576 108 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 RPS4XP3-201ENST00000398541 413 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 RN7SKP220-201ENST00000410611 288 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 RNA5SP344-201ENST00000411081 104 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC005300.1-201ENST00000428401 373 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 ZNF965P-201ENST00000432501 817 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 UBBP3-201ENST00000445497 241 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AL590664.1-201ENST00000448065 339 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 RN7SL863P-201ENST00000462370 296 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 OR5H5P-201ENST00000503164 928 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AP001542.1-201ENST00000591314 200 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC125494.3-201ENST00000602759 455 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC025588.3-201ENST00000604182 274 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AP001330.4-201ENST00000604350 154 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 NUTF2P8-201ENST00000604593 363 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AL356490.1-201ENST00000623079 479 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC083865.1-201ENST00000636634 831 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 U6.105-201ENST00000637379 88 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC011460.1-201ENST00000636268 1834 ntBASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CLHC1Q8NHS4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 RPL23AP57-201ENST00000332361 466 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC092745.2-202ENST00000411880 369 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC091862.1-201ENST00000438016 1100 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 ELOCP23-201ENST00000452014 332 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC034236.1-201ENST00000469891 373 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 RPL21P131-201ENST00000497298 483 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 DSTNP2-201ENST00000504533 515 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC009901.1-201ENST00000506703 541 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 OR10V3P-201ENST00000525712 725 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 SNRPGP16-201ENST00000533275 226 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC125611.2-201ENST00000551907 647 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 UBL5P2-201ENST00000583788 219 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AL133507.1-201ENST00000605269 557 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AL138880.2-201ENST00000616214 239 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC084757.4-201ENST00000616350 526 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 STMN1P1-201ENST00000617809 440 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC090617.9-201ENST00000623751 147 ntBASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.94□□□□□ -1.94
CLHC1Q8NHS4 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC024341.1-201ENST00000526444 1552 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC009501.3-201ENST00000605001 1352 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RNU6-989P-201ENST00000362756 107 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RNU6-252P-201ENST00000363232 107 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 SNORD56.5-201ENST00000364281 72 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RNA5SP139-201ENST00000364340 117 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 SNORD51.1-201ENST00000365405 77 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 SNORA1.3-201ENST00000384676 136 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 MIR183-201ENST00000384958 110 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RAP1BP1-201ENST00000412709 553 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 UBE2V1P9-201ENST00000414760 368 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC096632.1-201ENST00000427395 310 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC016696.1-201ENST00000446949 318 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AL358232.1-201ENST00000448030 501 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 OR6K1P-201ENST00000456766 971 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 RPL21P18-201ENST00000469899 480 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC110794.1-201ENST00000505816 425 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 HSPE1P20-201ENST00000538133 289 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AL606834.2-201ENST00000602954 668 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC004696.1-201ENST00000614345 607 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC024595.1-201ENST00000623088 387 ntBASIC2.93□□□□□ -1.94
CLHC1Q8NHS4 AC002064.3-201ENST00000623448 346 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms