Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MTND5P7-201ENST00000413558 1798 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNA5SP289-201ENST00000362332 137 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNA5SP213-201ENST00000391031 106 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNU4-47P-201ENST00000410876 114 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 HSPE1P28-201ENST00000443139 211 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 OR5H3P-201ENST00000502817 919 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 IGHVII-62-1-201ENST00000519283 235 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MAL2-203ENST00000534619 578 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC015849.6-201ENST00000605454 474 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL020991.1-201ENST00000612314 373 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 U3.42-201ENST00000408746 214 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 CASP3P1-201ENST00000446037 609 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC118282.1-201ENST00000506408 765 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC119751.1-201ENST00000513357 765 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 SCARNA17.1-201ENST00000516211 143 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 SCARNA17.2-201ENST00000516334 143 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNU6-295P-201ENST00000516901 104 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AP000942.3-201ENST00000603702 160 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.6-201ENST00000603753 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.11-201ENST00000604059 253 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.10-201ENST00000604330 253 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC008162.1-201ENST00000604718 254 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.1-201ENST00000604752 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.2-201ENST00000604983 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.5-201ENST00000605253 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.4-201ENST00000605279 254 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.12-201ENST00000605291 253 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.8-201ENST00000605353 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.9-201ENST00000605428 253 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL670379.7-201ENST00000605823 252 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC103810.6-201ENST00000606708 136 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 SCARNA17.4-201ENST00000614296 143 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL121882.1-201ENST00000422893 417 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RPL23AP4-201ENST00000427757 463 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 HMGN2P3-201ENST00000433603 273 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 HMGN2P5-201ENST00000436882 273 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNU6-319P-201ENST00000516025 108 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC005951.1-201ENST00000576706 485 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC011155.1-201ENST00000316512 456 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 SNORA64-201ENST00000384674 134 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 BTF3P7-201ENST00000407097 488 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MOB1AP2-201ENST00000446060 614 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC093392.2-201ENST00000450682 337 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RGS4-207ENST00000527809 817 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC009318.3-201ENST00000616916 503 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RPL21P3-201ENST00000395517 478 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 TRBV1-201ENST00000476502 284 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNA5SP480-201ENST00000516840 109 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 SNORD39.2-201ENST00000579995 76 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 CYCSP45-201ENST00000402289 315 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL023284.1-201ENST00000403956 276 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL592045.1-201ENST00000429867 352 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC008277.2-201ENST00000605196 797 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AL135786.2-201ENST00000608422 615 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC093831.2-201ENST00000624393 3427 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 AC087565.3-202ENST00000642085 1603 ntBASIC0.79□□□□□ -2.28
SYNE1Q8NF91 U8.2-201ENST00000363156 134 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms