Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 RNU2-21P-201ENST00000410368 188 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 ELOCP19-201ENST00000411919 318 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 MTND1P23-201ENST00000416931 372 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RPL36P19-201ENST00000430744 301 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RPS3AP54-201ENST00000435535 734 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RPL37P21-201ENST00000435890 276 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC091862.1-201ENST00000438016 1100 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 PDSS1P2-201ENST00000449397 678 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 APOOP2-201ENST00000461561 539 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC109327.1-201ENST00000471666 403 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RPL35P6-201ENST00000490024 372 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 RN7SKP298-201ENST00000515950 94 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AP002748.2-201ENST00000528671 348 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC105233.3-201ENST00000531125 744 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC135001.1-201ENST00000544546 283 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC009063.1-201ENST00000563342 702 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC090312.1-201ENST00000580637 348 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 BNIP3P23-201ENST00000599655 511 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 PRELID3BP8-201ENST00000604148 295 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 FAM27D1-201ENST00000612308 341 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC025588.4-201ENST00000615802 908 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 SEPT14P19-203ENST00000633205 211 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 AC093591.3-201ENST00000634516 308 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 Z82217.1-201ENST00000625157 8149 ntBASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
CLIP4Q8N3C7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 Y_RNA.97-201ENST00000363094 102 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 RNU6-441P-201ENST00000384545 106 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 U3.22-201ENST00000391120 215 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 OFD1P18Y-201ENST00000420889 959 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AL356535.1-201ENST00000440335 398 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 RAD23BP3-201ENST00000454157 1152 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 MTCO3P2-201ENST00000457365 171 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC017015.1-201ENST00000477387 286 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC069499.1-201ENST00000489433 509 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 RPS23P1-201ENST00000491662 432 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC021678.1-201ENST00000505195 936 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC008958.1-201ENST00000511047 682 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC068446.3-201ENST00000555285 382 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC087481.2-201ENST00000565492 330 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 MIR4637-201ENST00000582405 84 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC011477.5-201ENST00000586571 259 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC234771.5-201ENST00000600161 514 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC010857.1-201ENST00000606398 594 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AC097468.3-201ENST00000607956 456 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 MIR6715B-201ENST00000637172 77 ntBASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
CLIP4Q8N3C7 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.84□□□□□ -1.8
CLIP4Q8N3C7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
CLIP4Q8N3C7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLIP4Q8N3C7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
CLIP4Q8N3C7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.8
CLIP4Q8N3C7 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms