Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 MTATP6P27-201ENST00000416987 621 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RPL36AP36-201ENST00000418616 301 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC092647.1-201ENST00000420654 287 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC005517.2-201ENST00000424673 553 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 OR5BE1P-201ENST00000425977 939 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL691449.1-201ENST00000426570 421 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL117351.1-201ENST00000438864 766 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RPL23AP33-201ENST00000442301 452 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 MTND1P29-201ENST00000448112 647 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC005297.2-201ENST00000450430 606 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 MTND4LP3-201ENST00000468320 276 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC110792.1-201ENST00000491826 472 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL024509.2-201ENST00000493462 493 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC080014.1-201ENST00000496877 1201 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 POU5F1P7-201ENST00000508759 541 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC024589.1-201ENST00000512207 263 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 COX6CP8-201ENST00000522620 226 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 MED28P5-201ENST00000528254 438 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL139174.1-201ENST00000531489 886 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC063950.1-201ENST00000552036 308 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RN7SL703P-201ENST00000578485 302 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC008507.1-201ENST00000587506 734 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL606490.9-201ENST00000603331 271 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC026368.1-201ENST00000614934 690 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AL445264.1-201ENST00000621719 171 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC068137.4-201ENST00000638485 296 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 OR5BE1P-202ENST00000641168 1176 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 NMD3P1-201ENST00000439704 1488 ntBASIC3.78□□□□□ -1.8
BEST3Q8N1M1 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
BEST3Q8N1M1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 RNU6-339P-201ENST00000384310 107 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 RN7SKP266-201ENST00000410232 287 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 RAC1P3-201ENST00000416129 580 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 PSMA6P3-201ENST00000428242 164 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AL590399.6-201ENST00000446396 307 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 PPIAP3-201ENST00000450588 505 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC091564.1-201ENST00000464563 479 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC007537.2-201ENST00000472093 511 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC017015.1-201ENST00000477387 286 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC116337.2-201ENST00000477662 156 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC106872.3-201ENST00000495104 446 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 RPL29P14-201ENST00000495837 428 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 OR6C7P-201ENST00000547875 934 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC034105.4-201ENST00000568304 277 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 AC120057.2-201ENST00000571520 271 ntBASIC3.77□□□□□ -1.81
BEST3Q8N1M1 MTCYBP33-201ENST00000575007 1130 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms