Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS52Q8N1B4 AC018555.1-201ENST00000567548 1980 ntBASIC4.34□□□□□ -1.71
VPS52Q8N1B4 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
VPS52Q8N1B4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS52Q8N1B4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VPS52Q8N1B4 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 RPL21P132-201ENST00000331267 462 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 Y_RNA.302-201ENST00000364997 102 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 SNORA51.6-201ENST00000384151 125 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 RNU6-1226P-201ENST00000384317 107 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MIR124-3-201ENST00000384866 87 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MIR449B-201ENST00000384995 97 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 HMGB1P17-201ENST00000403495 628 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 RNA5SP306-201ENST00000411087 107 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC069157.1-201ENST00000421749 137 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 OR4F13P-201ENST00000428478 931 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC244035.1-201ENST00000430042 390 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MTND4P6-201ENST00000438297 472 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MTCO3P16-201ENST00000454456 754 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 SNORD108-201ENST00000459332 71 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 RPS15AP17-201ENST00000470598 390 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 RPL29P14-201ENST00000495837 428 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC114981.1-201ENST00000503897 678 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 CBX3P5-201ENST00000552017 521 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC063950.1-201ENST00000552036 308 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 HSPE1P3-201ENST00000559254 309 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MTCYBP33-201ENST00000575007 1130 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC136618.2-201ENST00000575091 400 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC025627.2-201ENST00000576220 160 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MIR4637-201ENST00000582405 84 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC004987.4-201ENST00000603383 338 ntBASIC4.33□□□□□ -1.72
VPS52Q8N1B4 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS52Q8N1B4 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 SNRPEP2-201ENST00000397592 279 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 RAB9AP3-201ENST00000412737 573 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 RPL31P45-201ENST00000419532 356 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 RPS12P23-201ENST00000419579 400 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC092832.1-201ENST00000422934 400 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AL358472.1-201ENST00000431295 329 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 UBE2FP3-201ENST00000436366 524 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 NOTCH2P1-201ENST00000443481 624 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 RAB9AP1-201ENST00000449393 573 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC009961.3-201ENST00000449832 765 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 OR6C5P-201ENST00000452388 923 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 RPL36AP13-201ENST00000457490 317 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC097493.1-201ENST00000463958 372 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC072039.1-201ENST00000477611 581 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 ACTR3P3-201ENST00000480448 893 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC109486.1-201ENST00000486833 374 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC016065.2-201ENST00000514530 444 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 PAICSP4-201ENST00000517543 1253 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC008802.1-201ENST00000519121 791 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC106038.2-201ENST00000520706 568 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC239860.2-201ENST00000525886 270 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC008127.2-201ENST00000549925 1075 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AP001180.3-201ENST00000582221 145 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC113194.1-201ENST00000606037 500 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC064801.1-201ENST00000612025 407 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 MIR7844-201ENST00000616161 122 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC244100.1-202ENST00000621554 382 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 Z69908.1-201ENST00000622603 247 ntBASIC4.32□□□□□ -1.72
VPS52Q8N1B4 AC139792.2-201ENST00000624218 587 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms