Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZC3H3Q8IXZ2 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZC3H3Q8IXZ2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
ZC3H3Q8IXZ2 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ZC3H3Q8IXZ2 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
ZC3H3Q8IXZ2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.65□□□□□ -1.82
ZC3H3Q8IXZ2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 NACA3P-201ENST00000359690 648 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RNU6-560P-201ENST00000364007 108 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 Y_RNA.333-201ENST00000365274 102 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RNU6-1226P-201ENST00000384317 107 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RNVU1-14-201ENST00000384770 164 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 MIR124-3-201ENST00000384866 87 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 MIR153-1-201ENST00000384914 90 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC073264.1-201ENST00000411508 416 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 LUZP4P1-201ENST00000415420 344 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RPL31P12-201ENST00000422587 358 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC093698.1-201ENST00000423843 571 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RPL7P44-201ENST00000424827 742 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 PSMA2P3-201ENST00000429685 675 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 ISCA1P2-201ENST00000438679 421 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 HMGB3P11-201ENST00000440127 604 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 RPL23AP16-201ENST00000441715 421 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 MTCO2P25-201ENST00000447065 681 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC011979.1-201ENST00000472300 483 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 SNORA48.10-201ENST00000516965 160 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 ZNF705CP-201ENST00000530515 889 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC004024.1-201ENST00000549244 247 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 GTF2IP8-201ENST00000560687 584 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AGGF1P8-201ENST00000562979 1000 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC015688.2-201ENST00000584523 262 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 BNIP3P26-201ENST00000600827 554 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 GAS5-AS1-201ENST00000602767 694 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC063944.3-201ENST00000609969 533 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC005332.6-201ENST00000613178 446 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AL158163.2-201ENST00000619110 700 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AL356321.1-201ENST00000621360 228 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AC022509.4-201ENST00000621404 572 ntBASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.65□□□□□ -1.83
ZC3H3Q8IXZ2 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 RNU6-356P-201ENST00000384140 107 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 RNU6-636P-201ENST00000384598 107 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 MIR1250-201ENST00000408098 113 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AL136133.1-201ENST00000413694 376 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AL592310.1-201ENST00000414330 671 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 MTCO3P1-205ENST00000422088 832 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 BX890604.2-201ENST00000427883 474 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 RPL26P28-201ENST00000451325 435 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 OFD1P3Y-201ENST00000453312 783 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 TRBV26-201ENST00000456572 344 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 HMGN1P18-201ENST00000457642 277 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC005410.1-202ENST00000460347 485 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC010301.1-201ENST00000473936 355 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 MTCO1P30-201ENST00000515244 580 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 RNU6-1225P-201ENST00000516336 65 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 OR4A45P-201ENST00000529954 901 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 SNORD39.3-201ENST00000584451 71 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 AP001269.3-201ENST00000588718 329 ntBASIC3.64□□□□□ -1.83
ZC3H3Q8IXZ2 HSPE1P14-201ENST00000605812 302 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms