Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 AC105227.2-201ENST00000615075 605 ntBASIC3.43□□□□□ -1.86
CCDC65Q8IXS2 MTND5P1-201ENST00000445440 1375 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 SNORA46-201ENST00000384762 135 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 RPL22P22-201ENST00000395439 379 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 MIR887-201ENST00000401258 79 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC009237.2-201ENST00000421358 284 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 OR2AS1P-201ENST00000427827 319 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC016696.1-201ENST00000446949 318 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC093278.1-201ENST00000494700 600 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 HIGD1AP6-201ENST00000521833 279 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AL157394.1-201ENST00000562983 1224 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC124283.4-201ENST00000581815 456 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC017100.2-201ENST00000584628 355 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 SRGNP1-201ENST00000603392 451 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC026741.1-201ENST00000605892 482 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 HMGN2P28-201ENST00000606102 262 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 AC090617.7-201ENST00000623952 126 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 MIR4496-201ENST00000635896 61 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CCDC65Q8IXS2 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC073055.1-201ENST00000456901 1621 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 SNORD67-201ENST00000390833 111 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 RNA5SP274-201ENST00000410484 108 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC104332.2-201ENST00000429959 156 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC011242.1-201ENST00000433596 1158 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 HSFY3P-201ENST00000444242 1191 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AL096829.2-201ENST00000446582 742 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 GXYLT1P1-201ENST00000446657 490 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 UQCRHP3-201ENST00000451503 251 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 PRELID3BP4-201ENST00000515476 571 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 MTCYBP28-201ENST00000566728 1132 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 MIR5004-201ENST00000579078 107 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AL031985.2-201ENST00000600955 480 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC092474.3-201ENST00000603022 568 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 AC008264.2-201ENST00000610193 3731 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 MTND5P28-201ENST00000438005 1594 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 MTCO1P24-201ENST00000515438 1558 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 ZNF849P-201ENST00000594711 1566 ntBASIC3.41□□□□□ -1.86
CCDC65Q8IXS2 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.4□□□□□ -1.86
CCDC65Q8IXS2 SNORA38.1-201ENST00000364172 131 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 U8.9-201ENST00000365667 134 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 OR51AB1P-201ENST00000429046 620 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AL512637.2-201ENST00000431287 1256 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC010881.1-201ENST00000433830 235 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 YWHAZP7-201ENST00000436906 631 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AL590399.6-201ENST00000446396 307 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AL359893.1-201ENST00000447628 1580 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 NECAP1P2-201ENST00000455668 727 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC008379.1-201ENST00000463655 464 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 MTCO3P35-201ENST00000485582 781 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 RN7SL20P-201ENST00000488827 297 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 RN7SL504P-201ENST00000494496 287 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC008628.1-201ENST00000508663 265 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 RNU6-711P-201ENST00000517255 106 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC124293.1-201ENST00000530034 493 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 MIR3944-201ENST00000581277 108 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 AP004247.3-201ENST00000608682 624 ntBASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC65Q8IXS2 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms