Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 Z75741.1-201ENST00000446793 314 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 PTENP1-201ENST00000447117 1215 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AP000893.1-201ENST00000474462 794 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC108734.3-201ENST00000481241 1165 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 RNU2-58P-201ENST00000516403 183 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 SNORA48.10-201ENST00000516965 160 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC087808.1-201ENST00000520501 361 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC006270.2-201ENST00000578523 652 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 SNORD39.3-201ENST00000584451 71 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC092954.1-201ENST00000609121 445 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 AC013470.4-201ENST00000619978 986 ntBASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
CCDC60Q8IWA6 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 Z83843.1-201ENST00000604070 3685 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AL136116.1-201ENST00000403591 381 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RNU2-42P-201ENST00000410697 113 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AL161449.1-201ENST00000414531 1199 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC063979.1-201ENST00000415539 377 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC092634.6-201ENST00000418558 192 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 MRPS36P1-201ENST00000421291 307 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC096632.1-201ENST00000427395 310 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC005345.1-201ENST00000431868 217 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 B3GNT2P1-201ENST00000434960 952 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC091862.1-201ENST00000438016 1100 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AL138799.3-201ENST00000438968 350 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RPL23AP76-201ENST00000441860 458 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC007327.1-201ENST00000447461 264 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 HMGN2P21-201ENST00000447764 270 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RPL29P29-201ENST00000448725 423 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC115115.1-201ENST00000449927 248 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RPS4XP2-201ENST00000458402 793 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC146507.1-201ENST00000468335 354 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC078817.1-201ENST00000492623 435 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RPL5P23-201ENST00000496040 868 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 NIPA2P2-201ENST00000496376 1083 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 BOLA3P3-201ENST00000505182 232 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RPL21P12-201ENST00000559810 515 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AP001269.3-201ENST00000588718 329 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 YPEL5P2-201ENST00000605553 359 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC091953.5-201ENST00000622919 233 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 AC090897.3-201ENST00000636973 1157 ntBASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
CCDC60Q8IWA6 MTND5P3-201ENST00000438536 1800 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 SNORD116.1-201ENST00000365628 92 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 SSXP10-201ENST00000402595 565 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 HMGN1P24-201ENST00000412282 298 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 RPS3AP9-201ENST00000417027 792 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 MTND2P16-201ENST00000419987 799 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 AC002075.2-201ENST00000425207 252 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 RPL23AP33-201ENST00000442301 452 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 PNPLA4P1-201ENST00000458328 305 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 RN7SL807P-201ENST00000470923 297 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 AC011979.1-201ENST00000472300 483 ntBASIC3.74□□□□□ -1.81
CCDC60Q8IWA6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms